| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4537 |
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| Symbol | |
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| ID | 1186220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5124914 |
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| End bp | 5125777 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395878 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_794290 |
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| Protein GI | 28871671 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCG CTCAGGCTCA TCTTCGTCCG CAGTGGCGTT CGCGACTGCG TCTGCGCTTG
CGCAATGGCC GGCTGGCGAT GCTCTCGGGT GGTGCGCTGC TTGGCGTGTG GTTGCTGCTG
GCACTCTTCG CCCCTTGGCT GGCACCCTAC GATCCGATTT ATCAGAACAC CGAACTGCGC
CTGCTCGCGC CACACCTCGC ACACCCGTTC GGCACCGACA ATTTTGGCCG CGATATTCTG
TCCAGAGTGA TCTGGGCGGC GCGCGTCGAC CTGCAGATCT GCGTGATCGG GGTGGTGTTC
CCGTTCATGA TCGGCACCTT TGTCGGTGCA TTATCGGGCT ATATCGGTGG CCGATTCGAC
AACCTGTGTA TGCGCCTCAT CGACATCGTT CTGGCGTTCC CGTTTCTGGT CTTGATGCTG
GCGATCATCG CCATTCTCGG GCCGGGCCTG AGCAGCTTTT ACATCGCCAT GGCGCTGGTG
GGCTGGGTGT CTTATGCGCG GCTTATTCGC TCACAGATTC TGGTCCTCAA GGAAAGCGAT
TTCGCCCTGG CGGCCAAGAG CCTGGGCTTT GGTCACCTGC GTATTCTGTT TCGCCATCTG
CTGCCCAACG CGATGTTCGG CTCGATTGTG TTTTCCATGT CCGATGCGGT GCTGGTGTTG
CTCAGTGGCG CGTCGGTCAG CTACCTGGGC CTGGGCGTGC AACCGCCGTT GGCCGAGTGG
GGCACGATGG TTGCCGAGGG GCAGGCGTTT CTGACCTCGG CCTGGTGGAT CTGCACCTTT
CCAGGCCTCG CCATCGTGAC ACTGGCCATG GGCTTCAGCC TGCTGGCCGA CGGCGTGGCC
GAAACACTGG GAGAGCGTCG ATGA
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| Protein sequence | MSVAQAHLRP QWRSRLRLRL RNGRLAMLSG GALLGVWLLL ALFAPWLAPY DPIYQNTELR
LLAPHLAHPF GTDNFGRDIL SRVIWAARVD LQICVIGVVF PFMIGTFVGA LSGYIGGRFD
NLCMRLIDIV LAFPFLVLML AIIAILGPGL SSFYIAMALV GWVSYARLIR SQILVLKESD
FALAAKSLGF GHLRILFRHL LPNAMFGSIV FSMSDAVLVL LSGASVSYLG LGVQPPLAEW
GTMVAEGQAF LTSAWWICTF PGLAIVTLAM GFSLLADGVA ETLGERR
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