| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4534 |
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| Symbol | |
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| ID | 1186217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5121372 |
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| End bp | 5122886 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637395875 |
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| Product | peptide ABC transporter, periplasmic peptide-binding protein, putative |
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| Protein accession | NP_794287 |
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| Protein GI | 28871668 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTC GACCAATGAA AATGCTGACC GTCGCTATGT TGGCGGCCTG TTCCCTGGCA
GCGGGTGTGG CAGAAGCCGC GGGCGTGCTG ACCATCGGCC GTCGTGAAGA CGGCACCACC
TTCGACCCGA TCAAAAGCGC GCAGAACATC GACAACTGGG TATTTTCCAA CGTCTACGAC
GTGCTGATCC GGGTGGACGA CAAAGGCACC AAGCTGTTGC CGGGGCTGGC GGAAAGCTGG
TCGATCTCGC CTGATGGCCT GACCTATACG CTGAAGATGC GTGAGGCGAA GTTCTCTGAT
GGTTCTGAGC TGACCGCCAG TGATGCGGTG TTCAGCCTGC TGCGAATTCG CGACGATAAA
GGCTCGCTGT GGAGCGATTC CTACAAGATC ATCGACAAAG TCGTCGCGAC CGATCCGCAT
ACACTGGTCA TCACGCTGAA AAATCCTTCA GCTTCGTTCC TCTCGCAATT GGCCTTGCCA
AACGTCTCGA TCCTCTCCGA GAAGGCCATG AAAACCCTGG GCGAAGAGGC TTACGCCGAA
AAGCCTGTCA GCTCCGGCGC CTTCACGGTG AAAGAATGGC GGCGTGGTGA CCGGGTGATT
CTGGCCAGAA ACCCCAACTT CTGGGAGGCG CCGAGCGTCA GCCTGGATGG TGTCGAGTGG
ATCTCGGTAC CGGATGACAA CACGCGCGTA CTGATGGTCC AGAAGGGCGA GCTGGACGCC
GCGATTCTGG TGCCCTTCTC TCGGATCGAA AATCTGAAGA AGAACCCTGA TCTGGTGGTG
CATCTGGACC CGTCCACCCG CGAAGATCAC TTGTTGATCA ACCACGAACA CGGCGCGCTG
GCCAAGCCGG AAGTACGCCA GGCACTGGAC ATGGCCATCG ACAAGAAATC GCTGATTGAT
GCCGCCACTT TCGGGCAGGG TACGGTGGCC AATTCCTACA TCCCCAAAGG TGCGCTGTAT
CATTACGCCG ATAATCTGCA ACGCCCCTAC GACCCGGTCA AAGCCAAAAA GATGCTGGCC
GATGCCGGTG CCTCTGACCT GAAACTCAAC TATGTGGTCA ATGCGGGCAA CGAAGTCGAT
GAGCAGATCT CGGTCATGCT TCAGCAGCAA CTGGCCAAGG TCGGCGTGAC CACGACGCTG
CAGAAGGTTG ATCCGAGCCA GAGCTGGCAG ATGCTGATCG ACGGTGATTA CGATATTTCC
GTGATGTACT GGACTAACGA CATTCTCGAC CCGGACCAGA AAACCACGTT CGTGCTCGGT
CACGACACCA ACAATAACTA CATGACCCGT TACAAGAACG AGAAGGTCAA GGAACTGGTC
GCTGCTGCGC GGGTGGAAAT GGACCCCAAA AAGCGTGAGC AGATGTACAT CGACCTGCAG
AAAATGGCCA AAGCCGACGT CAACTGGATC GACCTGTACT ACAGCCCTTA CATCAGTGTT
TCACGCAAGA ACATCGAGCA CTTCGGTCAG AACCCGCTGG GCCGATTCAC CCTTGAAGAA
ACCGTCAAGA AGTGA
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| Protein sequence | MKARPMKMLT VAMLAACSLA AGVAEAAGVL TIGRREDGTT FDPIKSAQNI DNWVFSNVYD
VLIRVDDKGT KLLPGLAESW SISPDGLTYT LKMREAKFSD GSELTASDAV FSLLRIRDDK
GSLWSDSYKI IDKVVATDPH TLVITLKNPS ASFLSQLALP NVSILSEKAM KTLGEEAYAE
KPVSSGAFTV KEWRRGDRVI LARNPNFWEA PSVSLDGVEW ISVPDDNTRV LMVQKGELDA
AILVPFSRIE NLKKNPDLVV HLDPSTREDH LLINHEHGAL AKPEVRQALD MAIDKKSLID
AATFGQGTVA NSYIPKGALY HYADNLQRPY DPVKAKKMLA DAGASDLKLN YVVNAGNEVD
EQISVMLQQQ LAKVGVTTTL QKVDPSQSWQ MLIDGDYDIS VMYWTNDILD PDQKTTFVLG
HDTNNNYMTR YKNEKVKELV AAARVEMDPK KREQMYIDLQ KMAKADVNWI DLYYSPYISV
SRKNIEHFGQ NPLGRFTLEE TVKK
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