| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4528 |
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| Symbol | |
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| ID | 1186211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5113687 |
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| End bp | 5114808 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395869 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_794281 |
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| Protein GI | 28871662 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATATT CTCCATCCGA GAAAGGAGAG CCGCCACTCT GGACACAAAT CCCACAAGCC
CTGTGCAACC GGAATGAAAC TTGCCTCCAC CTGTCCTGTG ACCTTGAAAC GTATTTAAGG
GCAAGGCCGA TGAATCACAA TAATATGGCG ATAAACCCTG CTTCGAACCA AGCGGCAGCA
CTGCCTCATC TAGGGCGTTT TCAAACCTGC GACATCGACG AGCACGGTCG TAACCTCAGC
GGCTGGCAGG TTCGGTACGA TCAAGTGACG CCCGGTGGCT TTGAAGGCGA ACTGACGGAG
TTTCGCTCGG ACTGGCTGCA ACTGGTCCGC GACCGCTCTA ATCAGGCCTT GGTCAAGAGT
GGCATGGCCT GGAAGGGGGC GATTATTTTT GCGCTGCCGT TGAGCGCCAA CGGTCCGGCT
TTCTGCGCCG GGCACACGCT TCAGGAGCCC AGCCTGATCG TCGCGCATGG CGAGAATCTT
CCGGAATTGA GTACGCCGCT GCAACTGGAT GCCCTGGGGG TGGCGATCGA AGAGGGTGCC
CTGGCTCATG CGCTGGAGCG TCAGGGCAGT CGTTTTGAAA TTACCGATCT TCCCAAGTGT
TACCGTTTGG CCGATCCAAC GGTTCGCACG AGGTTCGCTG CGTTGTTCGA TAACCTGTTG
AATGGTGAGC AGGCGTGCTT GCAGAAGCTT GAGTACGATT CGATCCGGCG GGGCATTCGC
GATGCTGTGA TGTTGCAGGT ACTGGAGCTG GTGGCGCCTG ATGAGGCGCC GCCGCTCAAC
CCCACGGCGC GCAAGAAAAT GGTGGATCGG GCCCGAGATT ATGCCTTGGC GCATCTGGAC
GAACCACTGT CCATCCTCGA TGTGTGCAAT CACATCGGCA CCAGTCGCCG CAAACTGCAG
TACTGTTTTC AGGAGACGCT GGGCATCAAC CCTGTGGCCT TTCTGCGCAC GTTGCGCCTC
AACGCAGCGA GGCGTGAGTT GCGCGAAAGC AGCCGGGTCG AACTCGTACA GACGGTCGCC
GCGCGCTGGG GTTTCTGGCA CCTGAGCCGG TTTTCCAGTG ACTACCGGAC GCTGTTCGGG
GAAACACCCT CGCAGACGTT ACAGCGCACG CATCTTTGCT GA
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| Protein sequence | MEYSPSEKGE PPLWTQIPQA LCNRNETCLH LSCDLETYLR ARPMNHNNMA INPASNQAAA
LPHLGRFQTC DIDEHGRNLS GWQVRYDQVT PGGFEGELTE FRSDWLQLVR DRSNQALVKS
GMAWKGAIIF ALPLSANGPA FCAGHTLQEP SLIVAHGENL PELSTPLQLD ALGVAIEEGA
LAHALERQGS RFEITDLPKC YRLADPTVRT RFAALFDNLL NGEQACLQKL EYDSIRRGIR
DAVMLQVLEL VAPDEAPPLN PTARKKMVDR ARDYALAHLD EPLSILDVCN HIGTSRRKLQ
YCFQETLGIN PVAFLRTLRL NAARRELRES SRVELVQTVA ARWGFWHLSR FSSDYRTLFG
ETPSQTLQRT HLC
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