Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4524 |
Symbol | |
ID | 1186207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5109010 |
End bp | 5109819 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395865 |
Product | hypothetical protein |
Protein accession | NP_794277 |
Protein GI | 28871658 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.725558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAC TGGATCACGC TTTTCACAGC CTGCATCAAA ATGGACTGCT GGTCCTGGCG AATGTGGCCG ACGCCGGCGG GGCGCGCATG GTGGAACATC TGGGCGGCAA AGCGGTGGCC ACCAGCAGCG CGGCCATGGC TTGGTCTCAT GGCTATCAGG ATGGCAATAA GCTTCCCCTG GAGCTGCTGA GCACAACCAT CCAATCGATG GTGCGCGTAC TCAATGTGCC ACTTACCGTG GATATCGAAG GCGGTTATTC GGATGAACTC GAGAAGGTCG GACAGGTGAT CAACGCCGTT GTCGGCGCCG GGGCGGTAGG CATCAACATC GAAGATGGCC TTGGCGCTCC AGAGCTGCTG GTTCGAAAAA TCGATGTCGC AAGACAGATG GCGCAACAGG CTGGAGTCGA TCTGTTCATC AATGTGCGTT GCGATGTCTA TTTGAAGAAT CTTTTCGCCC CGGAACAACG CCTGGAAGAG CTTCTGAAGC GCGCGGCACT GTATGCCGAT GCTGGCGCAG ATGGCCTGTT TGCAGCAGGC GTGGTGGATT CCAATGAAAT TGCGACCCTC TGTCAAAACA CTCAACTGCC GGTCAACCTG CTTTCCAGAG ACGGTCTGCC GTCCCCCGAC GAACTCAAAC GCCTGGGTGT CAGACGACTC AGCGCAGGCT CCAGCATTGC GGAATTCCTG TTCGGTGCCA TGGGCGGACT GATCCGCAGT TTTCTGGACA ACGGCCAACT GGATACCCAC ACCCTGAAAG CCCATACGTA TGGCGAATTG AACGCTCTGA TGGCATTGAA GGCAGTGTGA
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Protein sequence | MTTLDHAFHS LHQNGLLVLA NVADAGGARM VEHLGGKAVA TSSAAMAWSH GYQDGNKLPL ELLSTTIQSM VRVLNVPLTV DIEGGYSDEL EKVGQVINAV VGAGAVGINI EDGLGAPELL VRKIDVARQM AQQAGVDLFI NVRCDVYLKN LFAPEQRLEE LLKRAALYAD AGADGLFAAG VVDSNEIATL CQNTQLPVNL LSRDGLPSPD ELKRLGVRRL SAGSSIAEFL FGAMGGLIRS FLDNGQLDTH TLKAHTYGEL NALMALKAV
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