Gene PSPTO_4515 details

Gene Information

• Locus tag: PSPTO_4515
• Symbol: smpB
• ID: 1186198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5085014
• End bp: 5085496
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637395856
• Product: SsrA-binding protein
• Protein accession: NP_794268
• Protein GI: 28871649
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.10067
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAGC TCAAGAAACA CCCTACAGGG ACCATCGCGC AGAACAAAAA GGCGCGCCAC 
GATTACTTCA TCGAACACAA GTTCGAGGCC GGTCTGGTCC TGTCTGGCTG GGAAGTAAAA 
AGCCTGCGTG CCACCAAGGT ACAGCTGGTT GACAGTTACG TGCTGCTCAA GGACGGCGAG 
GCCTGGTTGA TGGGTTGCCA CATCACGCCT CTCAAGACTG CCAGCACGCA CGTCATCGCT 
GACCCGACAC GCACCCGTAA ACTGCTCCTG AACCAGCGCG AGCTCGAAAA GCTCACCAGC 
TCGGTTCAGC AAAAAGGCTA CGCCTGTGTC GCCCTTTCCA TTTACTGGAA GCAGCACTTG 
ATCAAGTGCG AAATTGCTTT GGGTAAAGGG AAAAAGGAAT ACGACAAGCG CCACACCGAG 
CGCGAACGCG ATTCGGACCG TGAGCTGCAG CGTGCCGTGC GCACCAAGGG CAAGGACGAC 
TAG 

 

Protein sequence

MAKLKKHPTG TIAQNKKARH DYFIEHKFEA GLVLSGWEVK SLRATKVQLV DSYVLLKDGE 
AWLMGCHITP LKTASTHVIA DPTRTRKLLL NQRELEKLTS SVQQKGYACV ALSIYWKQHL 
IKCEIALGKG KKEYDKRHTE RERDSDRELQ RAVRTKGKDD