| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4514 |
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| Symbol | |
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| ID | 1186197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5083497 |
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| End bp | 5084900 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395855 |
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| Product | sodium-dependent transporter, putative |
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| Protein accession | NP_794267 |
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| Protein GI | 28871648 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.22534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACGG ACAAGGTTTC GGTCCACGGT AGCTGGGCAA GTCGCTGGGT GTTCATCCTG
GCTGCCACCG GCTCTGCCGT GGGGCTGGGC AGTATCTGGA AATTCCCGTA CATGGTCGGT
GCCTATGGCG GCGGCGCATT TGTGCTGGTA TTTCTGGCGT GCATCGCGCT GATCGGCATT
CCGGTGATGA TCGCCGAGAC GCTGATTGGT CGTCGTTCGC GGCTCAGTCC TGCGAATGCG
CTCAAGACGC TGGCGGTCGA GGCGGGGCAT TCGGCGCGTT GGTCATGGGG TGCTTTCGCC
GGGATGATCA CGGCGTTGCT GATTCTCTCC TTCTATAGCG TGGTGGGCGG CTGGTCGCTG
GATTACATCA TCGACATGGG GCGTGGCGAT TTTCAGGGCG TGACGGCGGA TCAGGTCGGT
GCCTATTTCG GCGCGATGAT TGCCGACCCT TGGCGGCTGA TCTTGTGGCA CACGGTCTTT
ATGCTGCTGT CGGCTGTGGT CATCGGTAAA GGTGTCGAGG CAGGGCTGGA GCGCAGTCTG
CGGATCATGA TGCCGATGCT GTTCCTGCTG ATGCTGGCGC TGTTGGGCTA TAGCCTGACC
ACCGGGCACT TCATGGAAGG CGTGCATTTC ATGTTCGACT TCAACCCAGA CAAGGTGCTG
GACGGCTTGC TGCCAGCAAT GGGGCATGCG TTCTTTTCGT TGAGCGTCGG CGTTGGCTCG
ATCATGGTCT ACGGCGCGTA CATGACCAAA GGCGCCTCCA TCAGCACCAC GGTCGTGGGC
ATCGCGCTGC TCGATACGTT TGTTTCGCTG CTGGCCGGCT TGGCGTTGTT TCCGATTGTC
TTTGCCGCAG GGCTGAGTCC GAGCGAGGGG CCGGGTCTGA TGTTTGTCGC GCTGCCGTTC
GCGTTTGGTA ACGTTGCGTT CGGGCAGTTG ATGGGTGTCG TGTTCTTTGT GCTGGTCGCG
GTTGCGGCCT GGAGCTCGGC CATTTCGCTG CTTGAGCCAA TGGTTGCGTA CCTGGTCGAG
CGCACCCGTA TTCGCCGCGC CTGGGTGACG TTCTGGCTGG CATTTACCTG CTGGTTTGTC
GGTCTGGGAA CGGTGTTCTC GTTCAACATC TGGCAAAAAG CCAAGTTCTT CGTGAACGAT
GGAGGCGTAT TCCACCTCTA TCAATGGGGC GCATCGAATG GCCTGGACTT CTTCGGAGTC
ATTGATTTCT TCACCTCGCG GGTCATGTTG CCGCTGGGTG GGTTGTGTTT TGTAGTATTC
GCTGGTTGGG TGATGGGCCG TGAGGCGGTG CGCGACGAAT TGTCGATTCG CAGTCCGCTG
CTCTTTAACC TGACGTTCTT TTTGATGCGC TACGTGGCGC CGCTCGGCAT TCTTGTGGTG
TTTGCCGCTC AGCTCTGGAA ATGA
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| Protein sequence | MSTDKVSVHG SWASRWVFIL AATGSAVGLG SIWKFPYMVG AYGGGAFVLV FLACIALIGI
PVMIAETLIG RRSRLSPANA LKTLAVEAGH SARWSWGAFA GMITALLILS FYSVVGGWSL
DYIIDMGRGD FQGVTADQVG AYFGAMIADP WRLILWHTVF MLLSAVVIGK GVEAGLERSL
RIMMPMLFLL MLALLGYSLT TGHFMEGVHF MFDFNPDKVL DGLLPAMGHA FFSLSVGVGS
IMVYGAYMTK GASISTTVVG IALLDTFVSL LAGLALFPIV FAAGLSPSEG PGLMFVALPF
AFGNVAFGQL MGVVFFVLVA VAAWSSAISL LEPMVAYLVE RTRIRRAWVT FWLAFTCWFV
GLGTVFSFNI WQKAKFFVND GGVFHLYQWG ASNGLDFFGV IDFFTSRVML PLGGLCFVVF
AGWVMGREAV RDELSIRSPL LFNLTFFLMR YVAPLGILVV FAAQLWK
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