Gene PSPTO_4513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4513 
Symbol 
ID1186196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5083055 
End bp5083528 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID637395854 
Producthypothetical protein 
Protein accessionNP_794266 
Protein GI28871647 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.334417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGGTGTT TGCCGCTCAG CTCTGGAAAT GACGCTCACA TGACTACGCA CATACAACGC 
TCTGCTTTAC TGCCGTACCC GGCCGGTTTC CTTTATGACC TGGTCAATGA CGTGGCTCGT
TATCCCGAGT TTCTGCCGTG GTGCTCTTCC GCCACCGTGC TTGACGCCAG CGAGTCGCAA
ATGCGCGCCA GCCTGGAGAT CGCCAAGGGC GGTCTGAGTC AGAAGTTCAT GACGCGCAAT
ACGCTGGTCC CCGGCGAATC GATTGTGATG GATCTGGTCG AAGGGCCGTT CGAGCAGTTT
CATGGCGTCT GGACGTTCAA GCCGCTGGGT GAAAAGGCCT GCAAGATCAG CCTGGATTTG
TCTTTCGATT ACGCCGGAAC GATTGTACGC GCCACGTTGG GGCCGCTGTT CAATCAGGCG
GCCAACACGC TGGTGGATGC ATTCTGCCAG CGAGCGAAAG AGCTGCATGG CTGA
 
Protein sequence
MWCLPLSSGN DAHMTTHIQR SALLPYPAGF LYDLVNDVAR YPEFLPWCSS ATVLDASESQ 
MRASLEIAKG GLSQKFMTRN TLVPGESIVM DLVEGPFEQF HGVWTFKPLG EKACKISLDL
SFDYAGTIVR ATLGPLFNQA ANTLVDAFCQ RAKELHG