Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4513 |
Symbol | |
ID | 1186196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5083055 |
End bp | 5083528 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395854 |
Product | hypothetical protein |
Protein accession | NP_794266 |
Protein GI | 28871647 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.334417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGGTGTT TGCCGCTCAG CTCTGGAAAT GACGCTCACA TGACTACGCA CATACAACGC TCTGCTTTAC TGCCGTACCC GGCCGGTTTC CTTTATGACC TGGTCAATGA CGTGGCTCGT TATCCCGAGT TTCTGCCGTG GTGCTCTTCC GCCACCGTGC TTGACGCCAG CGAGTCGCAA ATGCGCGCCA GCCTGGAGAT CGCCAAGGGC GGTCTGAGTC AGAAGTTCAT GACGCGCAAT ACGCTGGTCC CCGGCGAATC GATTGTGATG GATCTGGTCG AAGGGCCGTT CGAGCAGTTT CATGGCGTCT GGACGTTCAA GCCGCTGGGT GAAAAGGCCT GCAAGATCAG CCTGGATTTG TCTTTCGATT ACGCCGGAAC GATTGTACGC GCCACGTTGG GGCCGCTGTT CAATCAGGCG GCCAACACGC TGGTGGATGC ATTCTGCCAG CGAGCGAAAG AGCTGCATGG CTGA
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Protein sequence | MWCLPLSSGN DAHMTTHIQR SALLPYPAGF LYDLVNDVAR YPEFLPWCSS ATVLDASESQ MRASLEIAKG GLSQKFMTRN TLVPGESIVM DLVEGPFEQF HGVWTFKPLG EKACKISLDL SFDYAGTIVR ATLGPLFNQA ANTLVDAFCQ RAKELHG
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