| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4506 |
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| Symbol | grpE |
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| ID | 1186189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5077768 |
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| End bp | 5078331 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637395847 |
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| Product | heat shock protein GrpE |
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| Protein accession | NP_794259 |
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| Protein GI | 28871640 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.316473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGACG AACAGAATCT GGATGCGCAG GCTCAGGATC AGGCTGCCGA GGCAGGCGCG
GGTGACGAGT TGACAACCCG CGTGCAGGTG CTCGAAGAGC AACTGGCTGC TGCGCAGGAC
CAATCCCTTC GGGTGGCTGC GGATTTGCAG AATGTCCGCC GCCGTGCCGA ACAGGATGTT
GAAAAGGCGC ACAAGTTTGC GCTGGAAAAA TTTGCCGGTG ATCTGTTGCC GATCATCGAC
AGTCTGGAGC GAGGCCTTGA TCTGTCCAAT CCGGACGATG AAAGCATTCG CCCGATGCGT
GAAGGCATCG AGCTGACCTT GAAGATGTTC CAGGACACCC TCAAGCGTTA TCAGCTGGAA
GCCATTGATC CGCATGGTCA ACCGTTCAGT GCCGACCAGC ACCAGGCAAT GGCCATGCAG
GAAAGTGCCG ATGTCGAGCC TAATACTGTG CTCAAGGTAT TCCAGAAGGG TTATCAGCTT
AATGGTCGTC TGCTGCGCCC GGCCATGGTC GTGGTCAGCA AGGCACCATC GCCTGCAACG
CCGTCAATCA ACGAGCAGGC TTGA
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| Protein sequence | MADEQNLDAQ AQDQAAEAGA GDELTTRVQV LEEQLAAAQD QSLRVAADLQ NVRRRAEQDV
EKAHKFALEK FAGDLLPIID SLERGLDLSN PDDESIRPMR EGIELTLKMF QDTLKRYQLE
AIDPHGQPFS ADQHQAMAMQ ESADVEPNTV LKVFQKGYQL NGRLLRPAMV VVSKAPSPAT
PSINEQA
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