| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4504 |
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| Symbol | dnaJ |
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| ID | 1186187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5074273 |
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| End bp | 5075415 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395845 |
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| Product | dnaJ protein |
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| Protein accession | NP_794257 |
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| Protein GI | 28871638 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC GTGATTATTA CGAAGTGTTG GGTGTGGAGC GAGGCTCCAG CGAGGCGGAC
CTGAAGAAGG CTTATCGTCG TCTGGCGATG AAGCATCACC CTGACCGCAA CCCTGATGAC
AAAGCGTCTG AAGAGATGTT CAAGGAGGCC AATGAGGCCT ACGAAGTGCT GTCCGATGCC
AGCAAACGCG CGGCCTACGA CCAGTACGGC CATGCAGGCG TTGACCCGAG CATGGGTGGC
GGCGGCGGGT TTGGCGGTGG TGCCGGTGGC GCCAACTTCT CGGACATCTT TGGCGACGTG
TTCAGCGACT TCTTCGGCGG TGGCCGGGGC GGTGGCGGTG GCGGTCGTGG CGGTGCCCAG
CGTGGCAGCG ACCTGCGTTA CACGCTTGAG CTGAACCTTG AGGAAGCGGT TCGCGGTACG
ACGGTGAATA TCCGCGTGCC GACGCTGGTC AACTGCAAGC CTTGCGACGG GAGCGGCGCC
AAGAAGGGCT CGTCCCCGGT GACCTGCCCG ACCTGTGGCG GTATTGGTCA GGTGCGCATG
CAGCAGGGGT TCTTCTCTGT GCAGCAAACC TGCCCACGTT GCCACGGCCA CGGCAAGATC
ATTTCTGACC CGTGTGACTC GTGCCACGGC GAAGGGCGTG TCGAAGAGTC CAAGACCCTT
TCCGTCAAAG TGCCGCCAGG TGTTGACACC GGTGACCGCA TTCGCCTGTC GGGCGAAGGC
GAGGCGGGTG CTCAGGGTGG GCCGACCGGC GACTTGTATG TCGTGATCAA TGTGCGCGAA
CACGCAATCT TCCAGCGTGA TGGCAAGCAT CTGTTCTGCG AAGTGCCGAT CAGCTTTACC
GACGCGGCGC TGGGCGGCGA GCTTGAAGTG CCGACGCTCG ATGGTCGCGT CAAACTGAAA
ATCCCTGAGG GCACCCAGAC CGGCAAGCAG TTCCGCTTGC GTGGCAAGGG TGTTGCTCCG
GTGCGTGGCG GTGGCGCGGG TGACTTGATG TGCCGCGTTG CAGTCGAAAC ACCGGTCAAC
CTGAGCAAGC GTCAGCGTGA ATTGCTCGAA GAGTTCCGCA CATCGCTTGA GAACGACGAG
TCCCACTCTC CCAAGGCCAG TGGCTGGTTC GAGGGTGTGA AGCGTTTCTT CGGCGATCTG
TAA
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| Protein sequence | MAKRDYYEVL GVERGSSEAD LKKAYRRLAM KHHPDRNPDD KASEEMFKEA NEAYEVLSDA
SKRAAYDQYG HAGVDPSMGG GGGFGGGAGG ANFSDIFGDV FSDFFGGGRG GGGGGRGGAQ
RGSDLRYTLE LNLEEAVRGT TVNIRVPTLV NCKPCDGSGA KKGSSPVTCP TCGGIGQVRM
QQGFFSVQQT CPRCHGHGKI ISDPCDSCHG EGRVEESKTL SVKVPPGVDT GDRIRLSGEG
EAGAQGGPTG DLYVVINVRE HAIFQRDGKH LFCEVPISFT DAALGGELEV PTLDGRVKLK
IPEGTQTGKQ FRLRGKGVAP VRGGGAGDLM CRVAVETPVN LSKRQRELLE EFRTSLENDE
SHSPKASGWF EGVKRFFGDL
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