| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4503 |
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| Symbol | dapB |
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| ID | 1186186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5073447 |
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| End bp | 5074250 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395844 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | NP_794256 |
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| Protein GI | 28871637 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACGTA TTGCTGTAGT AGGCGCCGCC GGGCGCATGG GCAAGACTTT GATCGAAGCG
GTTCAGCAGG CGCCTGGCGC CGGGCTGACC GCTGCCGTCG ATCGTCCCGA CAGCACGCTG
GTGGGTGCTG ATGCGGGCGA ACTGGCGGCG CTGGGCCGTA TCGGTGTGCC GTTGTCAGAT
GATCTGGCGA AGGTGATGGA TGAGTTCGAT GTGTTGATCG ACTTCACTCA CCCGTCGGTC
ACGCTGAAAA ACCTGGCGTT CTGCCGCAAG GCAGGCAAGG CCATGATTAT CGGGACGACC
GGTTTCAGTG CCGAAGAGAA GCAGCGTCTG GTCGAAGCGG GGAAAGACAT CCCGATCGTT
TTCGCGGCCA ATTTCAGCAT CGGTGTGAAT CTGTGCCTGA AGCTGCTCGA CACCGCTGCT
CGCGTGCTGG GTGATGAAGT CGATATCGAA ATCACCGAAG CGCACCATCG GCACAAAGTC
GATGCGCCGT CTGGTACCGC GCTGCGCATG GGCGAAGTAG TCGCCAATGC ACTGGGCCGT
GATCTGGAAA AAGTCGCGGT CTACGGGCGC GAAGGTCAGA CCGGCGCGCG TGATCGTCAG
ACCATCGGCT TTGCGACTAT TCGAGCCGGT GATGTGGTCG GTGACCATAC TGTGCTGTTC
GCAGCGGACG GCGAGCGGGT TGAAATCACC CACAAGGCGT CCAGCCGCAT GACCTTCGCC
AAGGGCGCGG TCAGGGCTGC AATGTGGCTC GACGGCAAGG CACCAGGCTT GTACGACATG
CAGGATGTAC TGGGTCTGCA TTGA
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| Protein sequence | MRRIAVVGAA GRMGKTLIEA VQQAPGAGLT AAVDRPDSTL VGADAGELAA LGRIGVPLSD
DLAKVMDEFD VLIDFTHPSV TLKNLAFCRK AGKAMIIGTT GFSAEEKQRL VEAGKDIPIV
FAANFSIGVN LCLKLLDTAA RVLGDEVDIE ITEAHHRHKV DAPSGTALRM GEVVANALGR
DLEKVAVYGR EGQTGARDRQ TIGFATIRAG DVVGDHTVLF AADGERVEIT HKASSRMTFA
KGAVRAAMWL DGKAPGLYDM QDVLGLH
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