Gene PSPTO_4497 details

Gene Information

• Locus tag: PSPTO_4497
• Symbol: ftsH
• ID: 1186180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5065022
• End bp: 5066926
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637395838
• Product: cell division protein FtsH
• Protein accession: NP_794250
• Protein GI: 28871631
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.554573
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGA ATTTGATCCT GTGGTTGATC ATCGCGGCTG TCCTTGTGAC GGTGATGAAC 
AACTTCTCAA GCCCTAACGA GCCGCAGAAC TTCAACTATT CCGAGTTCAT CCAGCAGGTC 
AAGGATGGCA AGGTCGAGAA GGTTTCTGTC GATGGCTACG TGATCACGGG CAAGCGCAGT 
GACGGTGACA CCTTCAAGAC CATTCGTCCG AACATTCCGG ACAATGGCCT GATCGGCGAT 
CTGGTCAGCA ACAACGTTGT GGTCGAAGGC AAGCAGCCCG AACAGCAGAG CATCTGGACC 
CAGTTGCTGG TCGCCAGCTT CCCGATTCTG GTGATCATCG CGGTCTTCAT GTTCTTCATG 
CGCCAGATGC AGGGCGGAGC GGGCGGCAAA GGCGGCCCGA TGAGCTTTGG CAAAAGCAAG 
GCGCGTCTGT TGTCTGAAGA TCAGGTCAAG ACCACCCTGG CGGATGTTGC AGGGTGTGAC 
GAAGCCAAGG AAGAAGTCGG CGAGCTCGTC GAGTTCCTCC GTGATCCTGG CAAGTTCCAG 
CGTCTGGGTG GTCGAATTCC GCGCGGCGTG CTGATGGTTG GTCCTCCGGG TACCGGCAAG 
ACGTTGATTG CCAAGGCGAT TGCCGGCGAA GCCAAAGTGC CGTTCTTCAC GATTTCCGGT 
TCCGACTTCG TCGAAATGTT TGTGGGTGTC GGTGCAAGCC GCGTCCGTGA CATGTTCGAA 
CAAGCCAAGA AACACGCGCC CTGCATCATC TTCATCGACG AAATCGATGC GGTCGGTCGT 
CATCGTGGTG CCGGCATGGG TGGTGGTCAC GACGAGCGCG AGCAGACCCT CAACCAGTTG 
CTGGTAGAGA TGGACGGCTT TGAAATGAAT GACGGCATCA TCGTCATTGC CGCGACCAAC 
CGTCCTGACG TACTGGACCC TGCATTGCTG CGTCCAGGCC GTTTCGACCG TCAGGTTGTG 
GTGGGTCTGC CGGACATTCG TGGTCGCGAG CAGATTCTCA AGGTCCACAT GCGCAAAGTG 
CCTATGGGTG AGGACGTCAA TCCAGGCGTT ATCGCTCGCG GTACTCCGGG TTTCTCCGGT 
GCCGATCTGG CCAACCTGGT CAACGAAGCG TCGCTGTTCG CTGCGCGCTC CGGCAAGCGT 
GTCGTCGAAA TGAAGGAATT CGAACTGGCC AAGGACAAGA TCATGATGGG CGCCGAGCGC 
AAATCGATGG TCATGTCCGA CAAGGAAAAA CGCAACACGG CTTACCACGA GGCGGGTCAC 
GCCATCGTCG GTCGTCTGGT GCCCGAGCAT GATCCGGTCT ACAAGGTGTC GATCATTCCT 
CGCGGCCGCG CTTTGGGTGT GACCATGTTC CTGCCCGAAG AAGACCGTTA CAGCCTGTCC 
AAGCGTGCGT TGATCAGCCA GATATGCTCG TTGTACGGCG GTCGTATCGC TGAAGAAATG 
ACCCTGGGCT TTGATGGCGT CACGACGGGT GCGTCCAACG ACATCATGCG TGCCAGCCAG 
ATTGCCCGGA ACATGGTCAC CAAATGGGGC CTGTCTGAAA AGCTGGGTCC ATTGATGTAC 
TCTGAAGACG AAGATGGTGG TTACCTGGGG CGCGGCGGCA GCCAGAATTC CAGTGTTTCC 
GGCGACACCG CCAAGCTGAT CGACTCGGAA GTACGCAGCA TCATCGACCA CTGCTACGGC 
ACCGCCAAGC AGCTGCTGAC GGACAATCGC GACAAGCTTG AAGCGATGGC CGACGCGTTG 
ATGAAGTACG AGACCATCGA TGCTGATCAG ATCGATGACA TCATGACCGG TCGCCCACCG 
CGCGAGCCGC GTGACTGGGA TGGCGGTTCA GGTACCAACG GTACTCCGAT CACACCTGAT 
CCTCGTCCGG AAACGCCTAT TGGCGGTCCT GCTGCTGAGC ATTAA 

 

Protein sequence

MAKNLILWLI IAAVLVTVMN NFSSPNEPQN FNYSEFIQQV KDGKVEKVSV DGYVITGKRS 
DGDTFKTIRP NIPDNGLIGD LVSNNVVVEG KQPEQQSIWT QLLVASFPIL VIIAVFMFFM 
RQMQGGAGGK GGPMSFGKSK ARLLSEDQVK TTLADVAGCD EAKEEVGELV EFLRDPGKFQ 
RLGGRIPRGV LMVGPPGTGK TLIAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE 
QAKKHAPCII FIDEIDAVGR HRGAGMGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN 
RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PMGEDVNPGV IARGTPGFSG 
ADLANLVNEA SLFAARSGKR VVEMKEFELA KDKIMMGAER KSMVMSDKEK RNTAYHEAGH 
AIVGRLVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALISQICS LYGGRIAEEM 
TLGFDGVTTG ASNDIMRASQ IARNMVTKWG LSEKLGPLMY SEDEDGGYLG RGGSQNSSVS 
GDTAKLIDSE VRSIIDHCYG TAKQLLTDNR DKLEAMADAL MKYETIDADQ IDDIMTGRPP 
REPRDWDGGS GTNGTPITPD PRPETPIGGP AAEH