| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4490 |
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| Symbol | infB |
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| ID | 1186171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5056608 |
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| End bp | 5059133 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395829 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | NP_794243 |
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| Protein GI | 28871624 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0593821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAAG TCACGGTGAA AGAACTGGCC AAAGTGGTCG ACACACCGGT AGAGCGCCTG
TTACAGCAGA TGCGTGAGGC AGGTCTGCCG CACACCGCCG CCGAGCAAGT TGTGACCGAT
AACGAAAAAC AAGCCTTGTT GACGCACCTG AAAAGCGGTC ACAAGGCCAA GGTGGAAGAG
CCTCGCAAGA TTACCTTGCA GCGCAAGACC ACCAGCACCC TGCGCGTTGC TGGCAGCAAG
AGCATCAGCG TTGAAGTGCG CAAGAAGAAA GTCTTTGTGC AGCGTAGCCC GGAAGAGATC
GAAGCCGAGC GCAAGCGCGA GATGGACGAA CGCCGTGCGG TAGAAAATGC CGCTCGTCAA
AAGGCTGAAG AAGAAGCCAA GCGTCGCGCT GAAGAAGATG CGCGCAATCA GCCTGCTGCC
GGCCAGCCTG CTTCGGCACC TGCGCAACCT GTTGCTGCCG CCGAGCCTGT GCGTGAAGCA
CCTGCAGCCG CTGCTCCGGC ACCTGCCAGC GCAGCGCCGT CTGCCGATGC ACGCAAGCGT
GACGAACAAC GTCGCCCTGA CAAGCCTCGT GCTGACGACC GCAACGCCCG TGGCGGCGAC
GGCGATCGCA AGAACGCTCC GCATCGTGCT TCGGTCAAAG AGAAGGCTCC GGCCCCTCGT
GTTGCACCTC GCACCACCGA CGAAGAAAGC GACAGCTTCC GTCGTGGTGG TCGTGGCAAG
GGCAAGCTGA AGAAGCGTAA CGCGCATGGT TTCCAGAGCC CTACCGGCCC GGTTATCCGT
GACGTTGCCA TCGGCGAGAC CATCACTGTG GGCGAATTGT CGGCACAGAT GTCGGTCAAG
GCTGCTGAAG TCATCAAATT CATGTTCAAG ATGGGCACCC CGGTGACCAT CAACCAGGTA
CTGGATCAGG AAACTGCCCA GTTGATCGCC GAAGAGCTGG GCCACAAGGT CACGCTGGTC
AGCGACAATG CCCTGGAAGA TTCCCTGGCG GAATCGCTGA AGTTCGAAGG CGAGTCGTTC
TCTCGTGCGC CGGTTGTGAC CGTAATGGGC CACGTCGACC ACGGCAAGAC TTCGCTGCTC
GACTACATCC GTCGCGCCAA GGTAGCGGCT GGTGAAGCCG GTGGTATCAC CCAGCACATC
GGTGCCTACC ACGTTGAAAC CGAACGCGGC ATGGTGACGT TCCTCGACAC CCCTGGTCAC
GCTGCGTTTA CCGCAATGCG CGCCCGTGGT GCCAAGGCGA CCGACATCGT GATTCTGGTG
GTTGCTGCCG ACGACGGCGT GATGCCACAG ACCATCGAAG CCGTTCAGCA TGCTGTTGCT
GCTGGCGTTC CGCTGGTGGT TGCGGTGAAC AAGATCGACA AGCCGGGTGC GGATCTCGAC
CGCATTCGCA GCGAGTTGTC AGTCCATGGC GTGACGTCCG AAGAGTGGGG TGGTGATACG
CCTTTCGTTT CGGTCTCCGC GAAAATGGGT ACTGGCGTCG ACGAGCTGCT GGAAGCTGTC
TTGCTGCAAG CCGAAGTCCT GGAACTCAAG GCAACGCCTT CGGCTCCTGG CCGTGGTGTT
GTTGTCGAGT CCCGTCTGGA CAAGGGCCGC GGTCCGGTTG CTACTGTTCT GGTTCAGGAC
GGTACGCTGC GTCAGGGCGA CATGGTTCTG GTCGGTTCGA ACTTCGGCCG CATCCGCGCC
ATGCTTGACG AGAACGGCAA GCCGGTCAAG GAAGCGGGTC CTTCCATCCC TGTCGAGATT
CTCGGCCTGG ACGGTACCCC GGACGCTGGC GACGAGATGA GCGTGCTGTC CGACGAGAAG
AAAGCCCGTG AAGTGGCTCT GTTCCGTCAA GGCAAGTTCC GTGAAGTCAA ACTGGCCCGT
GCCCACGCTG GCAAGCTGGA AAACATCTTC GAGAACATGG GTCAGGCAGA GAAGAAGACG
CTCAATATCG TCCTCAAATC TGACGTTCGT GGTTCCCTCG AAGCGTTGAA CGGCGCCTTG
AACGGCCTGG GTAACGACGA AGTGCAAGTG CGCGTAGTGG GTGGCGGTGT CGGTGGTATC
ACCGAGAGCG ACGCCAACCT GGCACTGGCG TCCAACGCTG TACTGTTCGG CTTCAACGTG
CGTGCCGATG CTGGCGCACG CAAGATTGTC GAGCAGGAAG GTCTGGATAT GCGTTACTAC
AACGTGATCT ACGACATCAT CGAAGACGTC AAGAAAGCCC TTACCGGTAT GCTTGGCAGC
GACGTTCGGG AGAATATCCT GGGTATTGCC GAAGTCCGCG ATGTGTTCCG TTCGCCGAAA
TTCGGCGCGA TCGCAGGTTG TATGGTTCTG GAAGGTACTG TTTACCGCAA CCGTCCAATC
CGTGTTCTGC GTGAAGACAT CGTTATCTTC GAAGGCGAGC TGGAATCCCT GCGCCGCTTC
AAGGATGACG CTGCCGATGT ACGTGCCGGC ATGGAATGCG GTATCGGCGT CAAGAGCTAC
AACGACGTCA AGGTTGGTGA CAAGATCGAA GTCTTCGAGA AGGTCCAAGT GGCTCGCAGC
CTCTAA
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| Protein sequence | MTQVTVKELA KVVDTPVERL LQQMREAGLP HTAAEQVVTD NEKQALLTHL KSGHKAKVEE
PRKITLQRKT TSTLRVAGSK SISVEVRKKK VFVQRSPEEI EAERKREMDE RRAVENAARQ
KAEEEAKRRA EEDARNQPAA GQPASAPAQP VAAAEPVREA PAAAAPAPAS AAPSADARKR
DEQRRPDKPR ADDRNARGGD GDRKNAPHRA SVKEKAPAPR VAPRTTDEES DSFRRGGRGK
GKLKKRNAHG FQSPTGPVIR DVAIGETITV GELSAQMSVK AAEVIKFMFK MGTPVTINQV
LDQETAQLIA EELGHKVTLV SDNALEDSLA ESLKFEGESF SRAPVVTVMG HVDHGKTSLL
DYIRRAKVAA GEAGGITQHI GAYHVETERG MVTFLDTPGH AAFTAMRARG AKATDIVILV
VAADDGVMPQ TIEAVQHAVA AGVPLVVAVN KIDKPGADLD RIRSELSVHG VTSEEWGGDT
PFVSVSAKMG TGVDELLEAV LLQAEVLELK ATPSAPGRGV VVESRLDKGR GPVATVLVQD
GTLRQGDMVL VGSNFGRIRA MLDENGKPVK EAGPSIPVEI LGLDGTPDAG DEMSVLSDEK
KAREVALFRQ GKFREVKLAR AHAGKLENIF ENMGQAEKKT LNIVLKSDVR GSLEALNGAL
NGLGNDEVQV RVVGGGVGGI TESDANLALA SNAVLFGFNV RADAGARKIV EQEGLDMRYY
NVIYDIIEDV KKALTGMLGS DVRENILGIA EVRDVFRSPK FGAIAGCMVL EGTVYRNRPI
RVLREDIVIF EGELESLRRF KDDAADVRAG MECGIGVKSY NDVKVGDKIE VFEKVQVARS
L
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