| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4486 |
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| Symbol | pnp |
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| ID | 1186167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5052402 |
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| End bp | 5054507 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395826 |
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| Product | polyribonucleotide nucleotidyltransferase |
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| Protein accession | NP_794240 |
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| Protein GI | 28871621 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCCGG TAATCAAAAA GTTTCAGTTC GGTCAATCGA CCGTAACCCT CGAGACAGGC
CGTATCGCCC GTCAAGCCTC TGGCGCAGTA TTGGTCACCG TTGACGACGA CGTCAGCGTA
CTTGTGACTG TGGTCGGCGC CAAACAGGCT GACGCTGGCA AAGGCTTCTT CCCTCTGTCC
GTGCACTATC AGGAAAAAAC CTACGCTGCC GGCAAGATTC CTGGTGGTTT CTTCAAGCGT
GAAGGCCGTC CTTCCGAGAA AGAAACCCTG ACCTCGCGCC TGATCGACCG TCCGATCCGT
CCGCTGTTTC CAGAAGGCTT CATGAACGAA GTGCAGGTTG TCTGCACAGT CGTTTCCACC
AGCAAGAAGA TCGATCCGGA CATCGCTGCG ATGATCGGTA CTTCGGCTGC TCTGGCCATC
TCCGGTATCC CGTTTGACGG TCCGGTTGGC GCTGCGCGCG TTGCTTTCCA CGAAAGCACC
GGCTACCTGC TGAACCCGAC TTACGAGCAA CTGCAGGCTT CGAGCCTGGA CATGGTCGTA
GCTGGTACTT CCGAAGCCGT TCTGATGGTT GAGTCTGAAG CCAAAGAGCT GACCGAAGAC
CAGATGCTGG GCGCTGTGCT GTTTGCCCAC GACGAGTTCC AGGTGGTCAT CAACGCCATC
AAGGAACTGG CTGCCGAAGC CGCCAAGCCT ACCTGGGACT GGCAGCCAAA GCCTGAAGCG
ACTGCACTGC TGGGCGCTAT CCGTGCCGAG TTCGGCGACG CGATCTCCCA GGCGTACACC
ATCACCGTCA AAGCCGACCG CTATGCGCGT CTGGGCGAGC TGAAAGACCA GGTCGTTGCC
AAGCTGGCTG TCGAAGAAGG CAGCCCGTCT GCCGGCGAAG TCAAAGCGGC TTTCGGTGAA
ATCGAATACC GCACCGTTCG CGAAAACATC GTCAACGGCA AGCCGCGTAT CGATGGCCGT
GACACTCGCA CTGTCCGCCC GCTGAACATC GAAGTCGGCG TTCTGCCAAA GACTCACGGT
TCGGCACTGT TCACCCGTGG CGAAACTCAG GCGCTGGTTG TTGCCACCCT GGGTACTGCA
CGCGACGCAC AGCTGCTCGA CACCCTTGAA GGCGAGAAAA AAGACCCGTT CATGCTGCAC
TACAACTTCC CTCCGTTCTC GGTGGGCGAG TGTGGTCGTA TGGGCGGCGC AGGTCGTCGC
GAGATCGGTC ACGGCCGTCT GGCACGCCGC AGCGTACAGG CTATGCTGCC GGGCGCTGAT
GTGTTCCCCT ACACCATCCG TGTTGTGTCG GAAATCACCG AGTCCAACGG TTCCAGCTCC
ATGGCTTCGG TCTGCGGCGC TTCTCTGGCA CTGATGGACG CTGGTGTTCC GATGAAGGCA
CCGGTTGCCG GTATCGCCAT GGGTCTGGTC AAGGAAGGCG AGAAGTTCGC CATTCTGACC
GACATCCTGG GTGACGAAGA TCACCTGGGC GACATGGACT TCAAAGTAGC CGGTACCTCC
AAAGGTGTTA CCGCGCTGCA GATGGACATC AAGATCAAAG GCATCACCGA AGAAATCATG
GAGATCGCTC TGGGCCAAGC CCTGGAAGCT CGCCTGAACA TCCTCGGTCA GATGAACCAG
ATCATCGGTC AGTCGCGTAA CGAATTGTCG GCCAACGCTC CGACCATGAT CGCGATGAAG
ATCGATACCG ACAAGATCCG TGACGTGATC GGCAAGGGTG GCGCGACCAT CCGTGCAATC
TGCGAAGAGA CCAAGGCTTC GATCGACATC GAAGATGACG GCTCGATCAA GATCTTCGGC
GAGTCCAAGG AAGCGGCTGA AGCAGCACGT CAGCGCGTTC TGGGTATCAC CGCAGAAGCA
GAGATCGGCA AGATCTACCT GGGCAAGGTT GAGCGCATCG TCGATTTCGG CGCATTCGTG
AACATCCTGC CTGGCAAGGA TGGCCTGGTA CACATCTCCA TGTTGAGCGA CGCTCGCGTA
GAGAAAGTGA CCGACATCCT GAAAGAAGGT GAAGAGGTCG AAGTACTGGT ATTGGACGTG
GACAACCGCG GTCGTATCAA GCTGTCGATC AAAGACGTCG CCGCAGCGAA AGCGTCGGGC
GTCTGA
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| Protein sequence | MNPVIKKFQF GQSTVTLETG RIARQASGAV LVTVDDDVSV LVTVVGAKQA DAGKGFFPLS
VHYQEKTYAA GKIPGGFFKR EGRPSEKETL TSRLIDRPIR PLFPEGFMNE VQVVCTVVST
SKKIDPDIAA MIGTSAALAI SGIPFDGPVG AARVAFHEST GYLLNPTYEQ LQASSLDMVV
AGTSEAVLMV ESEAKELTED QMLGAVLFAH DEFQVVINAI KELAAEAAKP TWDWQPKPEA
TALLGAIRAE FGDAISQAYT ITVKADRYAR LGELKDQVVA KLAVEEGSPS AGEVKAAFGE
IEYRTVRENI VNGKPRIDGR DTRTVRPLNI EVGVLPKTHG SALFTRGETQ ALVVATLGTA
RDAQLLDTLE GEKKDPFMLH YNFPPFSVGE CGRMGGAGRR EIGHGRLARR SVQAMLPGAD
VFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPMKA PVAGIAMGLV KEGEKFAILT
DILGDEDHLG DMDFKVAGTS KGVTALQMDI KIKGITEEIM EIALGQALEA RLNILGQMNQ
IIGQSRNELS ANAPTMIAMK IDTDKIRDVI GKGGATIRAI CEETKASIDI EDDGSIKIFG
ESKEAAEAAR QRVLGITAEA EIGKIYLGKV ERIVDFGAFV NILPGKDGLV HISMLSDARV
EKVTDILKEG EEVEVLVLDV DNRGRIKLSI KDVAAAKASG V
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