| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4482 |
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| Symbol | |
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| ID | 1186163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5046654 |
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| End bp | 5049662 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395822 |
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| Product | hypothetical protein |
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| Protein accession | NP_794236 |
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| Protein GI | 28871617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATACT CCAAGGGCTT CCAAAAGAGA GAGACGCCGC CGCCCATGTC CAAAGGATTG
AAACGCACAC TTGGCTCACT GCTGGCTGTG ATCGTGCTCT ACAGCTTGCT GGGGTTTTTC
ATCCTCCCCG GTGTCGCCCT GCGTATAGCG AATCAGCAAC TGGCCAATTA TTCGACCGTG
CCCGCCAAGC TCGAACGCCT GGAATTCAAT CCCTACACGC TGGAACTGAC CCTCTGGGGC
CTGAACATCG GCACGCCGGG CAAAGAACAG GTGGCGTTTG AAAAGCTCTA CGCCAACCTG
CAGATCGACA GCCTATGGAC CAAAGCGCTG CACCTGCAAC GCGTCGAACT GATCAAACCC
AAAGCCGAAC TGTTGTTCGA CAAGCAAGGC AAGCTCAATC TGGCGCAGTT GTTCAAGCTG
CCTGCCAGCG AACCTGCGAA AGACCAACCG CCGAGCAAGC CGTTCCCGCT GCGTATCGGC
GAGATCAAGC TGGCTGACGG CTACGTGCAC TTTCAGGATG TGCGCCCCAG CGAGCCGATC
GAATTCCTCT ACGACGCGCT GAATTTCGAA CTCAAGAACC TCAGCACTCT GCCCGAAGAC
AATGCCGACA TGACGCTGGT CGCGGCAGGC CCCGATGGCG GGCAGATCGA CTGGGTGGGC
CGCATCAGTC TGGTGCCGAT CACCTCCGAG GGCACGTTGA AGGTCACGGA CGGCAAGATG
AAGCTGTGGT GGCCTTATGT ACGTGACGCC CTGCCGCTGG CGCTTGAAAA TGGCGTGCTG
AATTTCAGCA CCGCTTACAA GCTCGACCTC TCCAAAGAAA CCGAACTCAA GCTGACCAAC
CTGTCGGCCA GTGTGGCGCC CTTCGCGCTG AACACCCCCG ACGGTCGCCC ACTGGTGCGC
CTGCAACGCC TGGATGTCAG CGAAACATCG GTTGATCTGG CCCGGCAACT GGTCAGTGTC
GGCAAGATTC GCAGCCAGAC GCTCGAAACC TGGGCAGCGC GCGAAGTCGA TGGCCAACTG
GACTGGCAAA AACTGTTCGC CAACCCGCCG GGCAAGCCTG CCGCGCCGAA AAAACCGGCA
GTGGACGAAA AGGCCGCTGA ACCGGCGCCT GCCCCCCAGA CATCTGCGCA AGCCAGCACT
CAGCCAGGCA AGCCGTGGCA AGTGCTGTTA CGCGATGTGC AACTGCGCAA CTACACGGTT
CACCTGACCG ATCGCGTGCC CAAAGAACCT GTTGCGCTGG ATGTCGGCCC GCTGAATCTG
GACATGCAAA ACTTCGACAG CCTGAACAAA TCCCCCTTCA CCCTCAAGCT AGACACCGGT
CTGGGCAAAC AGGGCAATCT CACTGCAACC GGCGACGTGA ACCTGAACCC GGTGAGCGCA
CGATTGAACG TGACCACCCG CGACATCGAT TTACGCGTCG CGCAGGCTTA CATCAGCCCG
TTCATTCTTC TTGAACTGCG CAGCGGCATG CTGGGCAGCG ATCTGGCGGT CAACCTGAAA
AGCACCGAGC CGCTGGCGTT CAGCGTCACG GGCAAAGCCC AGGTTAATCA GCTACACACG
CTCGACACAC TCAAACAGCG CGATTTTCTC AAGTGGCAAC AACTGGAGCT CGAAGGGCTG
GATTACCAGC ACGGCACGGG CCTGTCGATT GCCAAAGTCA ACATGAGCCA GCCGTACGCG
CGCTTCATGA TCAACGAAGA CCGAACCACC AACGTTGACG ACCTGCTGAT TCCGCAGCCC
GATGACAAGG CGGCCTCGCA GCCAAAAACA GCCAAGACCC AGCCCAAGGC CAAAACAGAG
AACCCGCTGG CGATCTATGT CGGTGAAGTG AACATCAAGG ACGGCTCGGC AAACTTTGCC
GACATGACCC TGACACCCAA CTTTGCGACC GCGGTGCAGC AACTCAATGG TCGCATCGGC
ACGATCAACA ACCGCAAAGC CACTCCGGCC CCGGTCGATA TCGAAGGCAA GGTAGACCGT
TATGCACCGG TGACCATCAA AGGCAGCCTC AACCCTTTCG ACCCGATGGC CAGCCTCGAC
ATCACAACCA GCTTCAAGCG CGTCGAGCTG ACCAACCTGA CGCCTTACTC GGGTAAATTC
GCCGGCTTCC GGATTCGCAA AGGCAGGCTC AACCTCGATT TGCACTACCT GATCACCAAG
GGCCAGCTCA AGGCACAGAA CAAAGTGCTG ATCGAACAGT TGCAACTGGG CGAACGGGTC
GACAGCCCGG ATGCGCTGGA CCTGCCTATT CGCCTGGCGG TTGCGCTGCT CAAGGACACC
AAGGGGCGCA TTTCCCTGGA GCTGCCTATC GAAGGCGACC TCAACAACCC TCAGTTCAGC
GTGATGCCTA TTGTCTGGCA GACGCTGCGT AACCTGGTGC TGCGCGCCGC GCAAGCGCCG
TTCAAGATGC TTGGCGGGCT GGTGGCAGGC GGCAGCTCCG AGGACCTCGG CAGCGTGAGT
TTCGCGCCAG GCGCCAGTGA CTTGTCGGTC GAGGCAAAAA AGGCGCTGGA CAAGCTCTCA
GCCGCACTCA AGGAGCGCCC GGACCTCAAG CTTGAGATTG AAGGCACCAG TGCCGCCAGC
AGTGACGGCC CGTTGATTGC CCAGCAGAGG CTGGAGCGGG AATACCAGTA TACGTATTAC
AAGATTCTTC AGAGACGCGG TGACAAGGTC CCGGCCAGGG CTGGGCTGAT TCAGGTCCCG
GACGATGAGA AAGCGCCGAT GCTTGAAGGC ATTTACCGAA CTCGCCTGAA ACAGCAACCG
CCTGCTGAAT GGGCAAACCT GGGCAAGGAA CAACGCGCAG GCCAGATGCG TGCCGCCGTA
CTCAAATTCT GGAGCGGTAA CGAGCTGTTG CTGCGTGAGC TGGGCCAGAG CAGGGCCAGT
AGCATCAAGG ATTATCTGGT GGACACCGGC AAGCTGGAAG ATGCGCGCGT GTATTTTGTC
GACGCCCGGC TGGGTCAGGC TCAACCGGAT GGTAAAGTCG TCAGCCCTCT CCACCTCGAC
AGTGAATAA
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| Protein sequence | MPYSKGFQKR ETPPPMSKGL KRTLGSLLAV IVLYSLLGFF ILPGVALRIA NQQLANYSTV
PAKLERLEFN PYTLELTLWG LNIGTPGKEQ VAFEKLYANL QIDSLWTKAL HLQRVELIKP
KAELLFDKQG KLNLAQLFKL PASEPAKDQP PSKPFPLRIG EIKLADGYVH FQDVRPSEPI
EFLYDALNFE LKNLSTLPED NADMTLVAAG PDGGQIDWVG RISLVPITSE GTLKVTDGKM
KLWWPYVRDA LPLALENGVL NFSTAYKLDL SKETELKLTN LSASVAPFAL NTPDGRPLVR
LQRLDVSETS VDLARQLVSV GKIRSQTLET WAAREVDGQL DWQKLFANPP GKPAAPKKPA
VDEKAAEPAP APQTSAQAST QPGKPWQVLL RDVQLRNYTV HLTDRVPKEP VALDVGPLNL
DMQNFDSLNK SPFTLKLDTG LGKQGNLTAT GDVNLNPVSA RLNVTTRDID LRVAQAYISP
FILLELRSGM LGSDLAVNLK STEPLAFSVT GKAQVNQLHT LDTLKQRDFL KWQQLELEGL
DYQHGTGLSI AKVNMSQPYA RFMINEDRTT NVDDLLIPQP DDKAASQPKT AKTQPKAKTE
NPLAIYVGEV NIKDGSANFA DMTLTPNFAT AVQQLNGRIG TINNRKATPA PVDIEGKVDR
YAPVTIKGSL NPFDPMASLD ITTSFKRVEL TNLTPYSGKF AGFRIRKGRL NLDLHYLITK
GQLKAQNKVL IEQLQLGERV DSPDALDLPI RLAVALLKDT KGRISLELPI EGDLNNPQFS
VMPIVWQTLR NLVLRAAQAP FKMLGGLVAG GSSEDLGSVS FAPGASDLSV EAKKALDKLS
AALKERPDLK LEIEGTSAAS SDGPLIAQQR LEREYQYTYY KILQRRGDKV PARAGLIQVP
DDEKAPMLEG IYRTRLKQQP PAEWANLGKE QRAGQMRAAV LKFWSGNELL LRELGQSRAS
SIKDYLVDTG KLEDARVYFV DARLGQAQPD GKVVSPLHLD SE
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