Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4474 |
Symbol | gatA |
ID | 1186155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5037897 |
End bp | 5039348 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637395814 |
Product | glutamyl-tRNA(Gln) amidotransferase, A subunit |
Protein accession | NP_794228 |
Protein GI | 28871609 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCAAA TGACTCTGGC CGAGATCGCT CGCGGACTCG CCGAAAAAAA GTTTTCTTCC GAAGAGCTGA CCCGCGTTCT GCTGTCGCGT ATCGCGCAGC TTGACCCGCA GCTCAATAGC TTCATCAGCC TCACCGAAGA CCTGGCCATC ACCCAGGCCC AGGCGGCAGA CGCCCGCCGT GCGGCCGGTG AAAACGGGCC GCTGCTCGGT GCCCCCCTGG CGCACAAGGA CCTGTTCTGC ACCCAGGGCA TTCGCACCAG TTGCGGCTCC CGGATGCTCG ACAACTTCAA GGCGCCGTAC GACGCCACGG TTGTGTCGAA ACTGGCTTCG GCCGGCACGG TAACGCTGGG CAAGACCAAC ATGGACGAAT TCGCCATGGG TTCGGCCAAC GAGTCCAGCC ATTACGGCGC GGTGAAAAAC CCGTGGAACC TGGAATGCGT GCCTGGCGGC TCCTCTGGCG GTTCGGCTGC AGCAGTTGCT GCACGCCTGC TGCCTGCGGC GACCGGCACC GACACCGGCG GTTCGATTCG CCAGCCAGCG GCGCTGACCA ACCTCACCGG CCTCAAGCCG ACCTACGGTC GTGTGTCGCG CTGGGGCATG ATTGCTTATG CGTCCAGCCT TGATCAGGCA GGCCCGATGG CTCGCACCGC CGAAGACTGC GCACTGCTGC TGCAAGGCAT GGCCGGTTTC GACCCGCAGG ACTCCACCAG CATCGACGAG CCGGTCCCGG ACTACTCCGC CAGCCTCAAT ACCTCGCTCA AGGGCCTGCG TATCGGTGTG CCGAAAGAAT ATTTCAGTGC AGGCCTCGAC CCGCGCATCG CGCAGCTGGT GCATGAGAGC GTCAAGGAGC TGGAAAAGCT CGGCGCAATC GTCAAGCAAG TCAGCCTGCC GAACCTGCAA CACGCCATTC CTGCCTACTA CGTCATCGCT CCGGCAGAAG CATCGTCCAA CCTGTCGCGT TTCGACGGCG TGCGCTTCGG CTACCGTTGT GAAGACCCGA AGGACCTGAC CGACCTGTAC AAGCGCTCGC GCGCCGAGGG CTTTGGCCCG GAAGTGCAGC GACGCATCAT GGTCGGCGCC TACGCGCTGT CGGCGGGTTA CTACGACGCC TATTACTTGC AGGCGCAGAA AATCCGCCGC CTGATCAAGA ACGATTTCAT GAGTGCATTT GCCGAAGTCG ACGTGATCCT CGGCCCGACC ACGCCTAACC CGGCCTGGAA AATCGGCGCC AAGACCCACG ACCCGATTGC CCAATACCTG GAAGACTTCT ACACCATCAC CGCCAACCTG GCGGGCCTGC CCGGCTTGTC CATGCCAGCG GGCTTTGTCG ATGGTCTGCC GGTCGGCGTG CAATTGCTCG CCCCGTATTT CCAGGAAGGC CGTCTCTTGA ATGTGGCGCA TCAGTATCAG CAAGTCACTG ACTGGCACAC TCGCGCACCT GAAGGCTTCT GA
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Protein sequence | MHQMTLAEIA RGLAEKKFSS EELTRVLLSR IAQLDPQLNS FISLTEDLAI TQAQAADARR AAGENGPLLG APLAHKDLFC TQGIRTSCGS RMLDNFKAPY DATVVSKLAS AGTVTLGKTN MDEFAMGSAN ESSHYGAVKN PWNLECVPGG SSGGSAAAVA ARLLPAATGT DTGGSIRQPA ALTNLTGLKP TYGRVSRWGM IAYASSLDQA GPMARTAEDC ALLLQGMAGF DPQDSTSIDE PVPDYSASLN TSLKGLRIGV PKEYFSAGLD PRIAQLVHES VKELEKLGAI VKQVSLPNLQ HAIPAYYVIA PAEASSNLSR FDGVRFGYRC EDPKDLTDLY KRSRAEGFGP EVQRRIMVGA YALSAGYYDA YYLQAQKIRR LIKNDFMSAF AEVDVILGPT TPNPAWKIGA KTHDPIAQYL EDFYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHQYQ QVTDWHTRAP EGF
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