Gene PSPTO_4474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4474 
SymbolgatA 
ID1186155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5037897 
End bp5039348 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content63% 
IMG OID637395814 
Productglutamyl-tRNA(Gln) amidotransferase, A subunit 
Protein accessionNP_794228 
Protein GI28871609 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCAAA TGACTCTGGC CGAGATCGCT CGCGGACTCG CCGAAAAAAA GTTTTCTTCC 
GAAGAGCTGA CCCGCGTTCT GCTGTCGCGT ATCGCGCAGC TTGACCCGCA GCTCAATAGC
TTCATCAGCC TCACCGAAGA CCTGGCCATC ACCCAGGCCC AGGCGGCAGA CGCCCGCCGT
GCGGCCGGTG AAAACGGGCC GCTGCTCGGT GCCCCCCTGG CGCACAAGGA CCTGTTCTGC
ACCCAGGGCA TTCGCACCAG TTGCGGCTCC CGGATGCTCG ACAACTTCAA GGCGCCGTAC
GACGCCACGG TTGTGTCGAA ACTGGCTTCG GCCGGCACGG TAACGCTGGG CAAGACCAAC
ATGGACGAAT TCGCCATGGG TTCGGCCAAC GAGTCCAGCC ATTACGGCGC GGTGAAAAAC
CCGTGGAACC TGGAATGCGT GCCTGGCGGC TCCTCTGGCG GTTCGGCTGC AGCAGTTGCT
GCACGCCTGC TGCCTGCGGC GACCGGCACC GACACCGGCG GTTCGATTCG CCAGCCAGCG
GCGCTGACCA ACCTCACCGG CCTCAAGCCG ACCTACGGTC GTGTGTCGCG CTGGGGCATG
ATTGCTTATG CGTCCAGCCT TGATCAGGCA GGCCCGATGG CTCGCACCGC CGAAGACTGC
GCACTGCTGC TGCAAGGCAT GGCCGGTTTC GACCCGCAGG ACTCCACCAG CATCGACGAG
CCGGTCCCGG ACTACTCCGC CAGCCTCAAT ACCTCGCTCA AGGGCCTGCG TATCGGTGTG
CCGAAAGAAT ATTTCAGTGC AGGCCTCGAC CCGCGCATCG CGCAGCTGGT GCATGAGAGC
GTCAAGGAGC TGGAAAAGCT CGGCGCAATC GTCAAGCAAG TCAGCCTGCC GAACCTGCAA
CACGCCATTC CTGCCTACTA CGTCATCGCT CCGGCAGAAG CATCGTCCAA CCTGTCGCGT
TTCGACGGCG TGCGCTTCGG CTACCGTTGT GAAGACCCGA AGGACCTGAC CGACCTGTAC
AAGCGCTCGC GCGCCGAGGG CTTTGGCCCG GAAGTGCAGC GACGCATCAT GGTCGGCGCC
TACGCGCTGT CGGCGGGTTA CTACGACGCC TATTACTTGC AGGCGCAGAA AATCCGCCGC
CTGATCAAGA ACGATTTCAT GAGTGCATTT GCCGAAGTCG ACGTGATCCT CGGCCCGACC
ACGCCTAACC CGGCCTGGAA AATCGGCGCC AAGACCCACG ACCCGATTGC CCAATACCTG
GAAGACTTCT ACACCATCAC CGCCAACCTG GCGGGCCTGC CCGGCTTGTC CATGCCAGCG
GGCTTTGTCG ATGGTCTGCC GGTCGGCGTG CAATTGCTCG CCCCGTATTT CCAGGAAGGC
CGTCTCTTGA ATGTGGCGCA TCAGTATCAG CAAGTCACTG ACTGGCACAC TCGCGCACCT
GAAGGCTTCT GA
 
Protein sequence
MHQMTLAEIA RGLAEKKFSS EELTRVLLSR IAQLDPQLNS FISLTEDLAI TQAQAADARR 
AAGENGPLLG APLAHKDLFC TQGIRTSCGS RMLDNFKAPY DATVVSKLAS AGTVTLGKTN
MDEFAMGSAN ESSHYGAVKN PWNLECVPGG SSGGSAAAVA ARLLPAATGT DTGGSIRQPA
ALTNLTGLKP TYGRVSRWGM IAYASSLDQA GPMARTAEDC ALLLQGMAGF DPQDSTSIDE
PVPDYSASLN TSLKGLRIGV PKEYFSAGLD PRIAQLVHES VKELEKLGAI VKQVSLPNLQ
HAIPAYYVIA PAEASSNLSR FDGVRFGYRC EDPKDLTDLY KRSRAEGFGP EVQRRIMVGA
YALSAGYYDA YYLQAQKIRR LIKNDFMSAF AEVDVILGPT TPNPAWKIGA KTHDPIAQYL
EDFYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHQYQ QVTDWHTRAP
EGF