Gene PSPTO_4471 details

Gene Information

• Locus tag: PSPTO_4471
• Symbol: mreC
• ID: 1186152
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5035041
• End bp: 5036120
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637395811
• Product: rod shape-determining protein MreC
• Protein accession: NP_794225
• Protein GI: 28871606
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1792] Cell shape-determining protein
• TIGRFAM ID: [TIGR00219] rod shape-determining protein MreC

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.712319
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGGCCG TTCTGTCGGT AGCGTTGATG GTGGTCGACG CCCGCTTTAC GATCCTCAAG 
CCCGTGCGCA GCCAGATGTC GATGGTGCTC ATGCAGTCTT ACTGGGTCGT CGATCTGCCA 
CAACGTTTGT ATCAGGGCGT TGCCAGTCAG TTCGGCAGCC GCACAGAACT CATCGCTGAA 
AACGAAAAAC TCAAGACCGA AGCCCTGCTC CTGCAAGGTC GCCTGCAAAA GCTGGCGGCA 
CTGACCGAGC AGAACGTGCG CCTGCGCGAG CTGCTGAACT CTTCGGCGCT GGTCAACGAG 
AAGGTCGAGG TCGCCGAGCT GATTGGCATG GACCCGAACC CCTTCACCCA TCGCATTATC 
ATCAACAAGG GCGAGCGCGA TGGCGTGGTG CTCGGGCAGC CGGTGCTCGA TGCACGGGGC 
CTGATGGGCC AGGTCGTCGA ATTGATGCCC TACACCTCGC GGGTTCTGCT GCTGACTGAC 
ACGACCCACA GCATTCCGGT GCAGGTCAAT CGCAACGGCC TGCGTGCCAT TGCCAGCGGC 
ACCGGTAACC CGGAACGCCT TGAGCTTCGG CATGTGGCGG ACACCGCAGA CATCAAGGAA 
GGCGATCTGC TGGTCAGCTC CGGCCTTGGT CAGCGTTTTC CGGCAGGCTA CCCGGTGGCC 
ACGGTCAAGG AGGTCATTCA CGACTCCGGT CAGCCTTTCG CGATTGTCCG CGCCGTGCCT 
ACGGCCGCTT TGAATCGTAG TCGCTACCTG TTGCTGGTGT TCTCCGACGG TCGCTCGCCC 
GAAGAGCGCG CTGCCGATGC CGCGCAGGCT CAGGAGTCGA TCGACAAAGG CCTCGAACCC 
ACGGTCATGG CTACCTTGCC GCCGCCAACA CCGGCATTTC CGATGTGGCC GCAAGCAACG 
GTGCCGACGT TCCCCGGCAG TACAACGACG CATAAACCCG CCGCGCAACC CGCGACGCCA 
GCTCCGGCTG CCACGCCTGC CGCGACTCCG GCAGCAAGGC CCGCCGCCCG ACCTGCTGCG 
TCGCGTCCGC CTGCGTCCAC GCCTTCCAAC TCCAACGCCC GGGAGCCTAT CGATGGTTAG 

 

Protein sequence

MLAVLSVALM VVDARFTILK PVRSQMSMVL MQSYWVVDLP QRLYQGVASQ FGSRTELIAE 
NEKLKTEALL LQGRLQKLAA LTEQNVRLRE LLNSSALVNE KVEVAELIGM DPNPFTHRII 
INKGERDGVV LGQPVLDARG LMGQVVELMP YTSRVLLLTD TTHSIPVQVN RNGLRAIASG 
TGNPERLELR HVADTADIKE GDLLVSSGLG QRFPAGYPVA TVKEVIHDSG QPFAIVRAVP 
TAALNRSRYL LLVFSDGRSP EERAADAAQA QESIDKGLEP TVMATLPPPT PAFPMWPQAT 
VPTFPGSTTT HKPAAQPATP APAATPAATP AARPAARPAA SRPPASTPSN SNAREPIDG