Gene PSPTO_4470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4470 
Symbol 
ID1186151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5034557 
End bp5035048 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content58% 
IMG OID637395810 
Productrod shape-determining protein MreD 
Protein accessionNP_794224 
Protein GI28871605 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGTC ATGTTTCCGG GCGCAACGGC TGGGTAGTCT GGCTGACGTT CGCAATCGGT 
TTGTTGCTGA GTGTTTCGCC GCTGCCGCAG TTCATGGAAA TCTTTCGGCC GCTGTGGCTG
GCCTTGCTGT TAACCTTCTG GGTACTGGCG CTGCCGCACA AATACGGCAT GACCACGGCG
TGGATATTGG GGCTGATGGA GGACGTGCTG TACGGCACGC TGCTCGGCCA GAATGCGCTG
ATCCTCAGCC TGATCACGTT CCTGGTGATG TCCTTGCAGC AGCGTCTGCG CATGTTCCCC
ATGTGGCAAC AGTGCCTGGT GCTGCTGGTG GTGTTCGGTC TGGCGCAGCT TGCGCAGTTG
TGGCTCAGTG CCTTGACGGG CAATCGCCAG CCAACCCTTG CGCTGGTGTT GCCTGCTTTG
GTCAGTGCGC TGTTGTGGCC TTGGGTCAGT TATGGTCTGC GTGGATTGCG CAAACGTTTG
AAAATCAATT AA
 
Protein sequence
MVSHVSGRNG WVVWLTFAIG LLLSVSPLPQ FMEIFRPLWL ALLLTFWVLA LPHKYGMTTA 
WILGLMEDVL YGTLLGQNAL ILSLITFLVM SLQQRLRMFP MWQQCLVLLV VFGLAQLAQL
WLSALTGNRQ PTLALVLPAL VSALLWPWVS YGLRGLRKRL KIN