Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4470 |
Symbol | |
ID | 1186151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5034557 |
End bp | 5035048 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395810 |
Product | rod shape-determining protein MreD |
Protein accession | NP_794224 |
Protein GI | 28871605 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAGTC ATGTTTCCGG GCGCAACGGC TGGGTAGTCT GGCTGACGTT CGCAATCGGT TTGTTGCTGA GTGTTTCGCC GCTGCCGCAG TTCATGGAAA TCTTTCGGCC GCTGTGGCTG GCCTTGCTGT TAACCTTCTG GGTACTGGCG CTGCCGCACA AATACGGCAT GACCACGGCG TGGATATTGG GGCTGATGGA GGACGTGCTG TACGGCACGC TGCTCGGCCA GAATGCGCTG ATCCTCAGCC TGATCACGTT CCTGGTGATG TCCTTGCAGC AGCGTCTGCG CATGTTCCCC ATGTGGCAAC AGTGCCTGGT GCTGCTGGTG GTGTTCGGTC TGGCGCAGCT TGCGCAGTTG TGGCTCAGTG CCTTGACGGG CAATCGCCAG CCAACCCTTG CGCTGGTGTT GCCTGCTTTG GTCAGTGCGC TGTTGTGGCC TTGGGTCAGT TATGGTCTGC GTGGATTGCG CAAACGTTTG AAAATCAATT AA
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Protein sequence | MVSHVSGRNG WVVWLTFAIG LLLSVSPLPQ FMEIFRPLWL ALLLTFWVLA LPHKYGMTTA WILGLMEDVL YGTLLGQNAL ILSLITFLVM SLQQRLRMFP MWQQCLVLLV VFGLAQLAQL WLSALTGNRQ PTLALVLPAL VSALLWPWVS YGLRGLRKRL KIN
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