Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4466 |
Symbol | |
ID | 1186147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5027542 |
End bp | 5028387 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637395806 |
Product | hydrolase, carbon-nitrogen family |
Protein accession | NP_794220 |
Protein GI | 28871601 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000896409 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTCG CTGTGATTCA GATGGTCAGC CAGAGCGATG TCCAGGCTAA TCTGGCCAGC GCCCGCCGAT TGCTCGAACA GGCGGCAGAA GGCGGTGCCA GGCTCGCCGT GCTGCCGGAA AACTTCGTCG CAATGGGGCG CCGTGATGTC GCTGATATCG GTCGTGCCGA GGCTGATGGG CACGGCCCCA TCCTGCCATG GTTGAAACTG GCCGCTCGCG ACCTCAAGTT ATGGATTGTT GCCGGAACAT TGCCACTGCC GCCGACCGCG CAGCCAGCGG GCAAGGTCAC CGCCTGTTCG CTGCTGGTTG ACGAGCATGG CGAGCAGATA GCGCGCTATG ACAAGCTGCA TTTGTTTGAC GTGGATGTTG CCGACAGCCG AGGCCGCTAC CGTGAATCGG ATGACTATGC TCATGGCAGC AAGGTTGTGG TGGTCGATAC GCCGGTCGGT CGTCTGGGGT TGAGCGTGTG TTATGACCTG CGCTTCCCGG AGCTTTACAC CGCGCTGCGT GAAGCCGGCG CTGAACTGAT CACGGCCCCG TCGGCATTCA CAGCGGTCAC CGGCGCTGCG CACTGGGACA TTCTGATCAG GGCGCGCGCC GTCGAAACCC AGTGCTACGT GCTGGCGGCG GCACAAGGCG GGGTCCATCC GGGGCCTCGC GAGACTTACG GACACGCGGC CATCGTTGAT CCATGGGGCC GCGTACTGGA TCAGCAAGCG CAGGGTGAAG CCGTGCTGCT GGCCACACGC GACAGTGAAG AACAAGCGTC CATACGGGCG CGGATGCCGG TGTCCAGTCA CCGGCGCTTT TTTTCGCAGG ACGCCATGCG GCCTGCTTCG GAGTGA
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Protein sequence | MTFAVIQMVS QSDVQANLAS ARRLLEQAAE GGARLAVLPE NFVAMGRRDV ADIGRAEADG HGPILPWLKL AARDLKLWIV AGTLPLPPTA QPAGKVTACS LLVDEHGEQI ARYDKLHLFD VDVADSRGRY RESDDYAHGS KVVVVDTPVG RLGLSVCYDL RFPELYTALR EAGAELITAP SAFTAVTGAA HWDILIRARA VETQCYVLAA AQGGVHPGPR ETYGHAAIVD PWGRVLDQQA QGEAVLLATR DSEEQASIRA RMPVSSHRRF FSQDAMRPAS E
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