Gene PSPTO_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4466 
Symbol 
ID1186147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5027542 
End bp5028387 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content63% 
IMG OID637395806 
Producthydrolase, carbon-nitrogen family 
Protein accessionNP_794220 
Protein GI28871601 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000896409 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTCG CTGTGATTCA GATGGTCAGC CAGAGCGATG TCCAGGCTAA TCTGGCCAGC 
GCCCGCCGAT TGCTCGAACA GGCGGCAGAA GGCGGTGCCA GGCTCGCCGT GCTGCCGGAA
AACTTCGTCG CAATGGGGCG CCGTGATGTC GCTGATATCG GTCGTGCCGA GGCTGATGGG
CACGGCCCCA TCCTGCCATG GTTGAAACTG GCCGCTCGCG ACCTCAAGTT ATGGATTGTT
GCCGGAACAT TGCCACTGCC GCCGACCGCG CAGCCAGCGG GCAAGGTCAC CGCCTGTTCG
CTGCTGGTTG ACGAGCATGG CGAGCAGATA GCGCGCTATG ACAAGCTGCA TTTGTTTGAC
GTGGATGTTG CCGACAGCCG AGGCCGCTAC CGTGAATCGG ATGACTATGC TCATGGCAGC
AAGGTTGTGG TGGTCGATAC GCCGGTCGGT CGTCTGGGGT TGAGCGTGTG TTATGACCTG
CGCTTCCCGG AGCTTTACAC CGCGCTGCGT GAAGCCGGCG CTGAACTGAT CACGGCCCCG
TCGGCATTCA CAGCGGTCAC CGGCGCTGCG CACTGGGACA TTCTGATCAG GGCGCGCGCC
GTCGAAACCC AGTGCTACGT GCTGGCGGCG GCACAAGGCG GGGTCCATCC GGGGCCTCGC
GAGACTTACG GACACGCGGC CATCGTTGAT CCATGGGGCC GCGTACTGGA TCAGCAAGCG
CAGGGTGAAG CCGTGCTGCT GGCCACACGC GACAGTGAAG AACAAGCGTC CATACGGGCG
CGGATGCCGG TGTCCAGTCA CCGGCGCTTT TTTTCGCAGG ACGCCATGCG GCCTGCTTCG
GAGTGA
 
Protein sequence
MTFAVIQMVS QSDVQANLAS ARRLLEQAAE GGARLAVLPE NFVAMGRRDV ADIGRAEADG 
HGPILPWLKL AARDLKLWIV AGTLPLPPTA QPAGKVTACS LLVDEHGEQI ARYDKLHLFD
VDVADSRGRY RESDDYAHGS KVVVVDTPVG RLGLSVCYDL RFPELYTALR EAGAELITAP
SAFTAVTGAA HWDILIRARA VETQCYVLAA AQGGVHPGPR ETYGHAAIVD PWGRVLDQQA
QGEAVLLATR DSEEQASIRA RMPVSSHRRF FSQDAMRPAS E