| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4463 |
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| Symbol | pmbA |
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| ID | 1186144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5024076 |
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| End bp | 5025422 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395803 |
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| Product | pmbA protein |
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| Protein accession | NP_794217 |
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| Protein GI | 28871598 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0853906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAA CCCAAAGCGT CGGCCCACAA GCCTTGCCCG AGCTGCAGGA ACAGGTCGAA
CAGATTATCG CCGAAGCCAG GCGTCAGGGC GCCAGTGCCT GCGAAGTTGC AGTGTCGGTG
GATCAGGGGC TGTCGACATC GGTTCGTCAG CGAGAAGTCG AGACCGTCGA ATTCAATCGT
GACCAGGGTT TTGGTATCAC CCTGTACGTC GGGCAGCGCA AAGGCTCGGC CAGCACCTCG
GCCACCGGCG CCGATGCCAT TCGCGAAACG GTCGCCGCCG CACTGGCGAT TGCCGAGCAC
ACCTCCGAGG ACGAAAGCTC CGGGCTGGCG GATGCTGCGC TGATGGCCAA AGAGGTCATG
GACTTCGATC TTTATCACAC CTGGGACATC ACCCCTGAAC AAGCCATCGA GAAAGCGCTG
ATCTGCGAAG CCGCAGCTTT CGATGCCGAC AGCCGGATCA AGAACGCCGA TGGCACCACG
CTCAACACGC ATCAGGGGTG CCGTGTGTAT GGCAACAGCA ACGGTTTCAT CGGTGGCTAT
GCATCGACAC GGCACAGCCT CAGTTGCGTG ATGATCGCTG AGGGCGAAGG GCAGATGCAG
CGTGATTACT GGTACGACGT CAATCGCAAG GGTGAGCTGC TGGTTGATGC CCAAAGCATC
GGCCGCAAGG CCGCGCTGCG TGCGGCGAGC CGTCTGGGTG CGCGCCCTGT GCCAACCTGT
GAAGTGCCGG TGCTGTTTGC TGCGGAACTG GCAGGTGGGC TGTTCGGCAG TTTTCTCGGC
GCTATTTCCG GTGGCAGCCT GTATCGCAAG TCTTCATTCC TTGAAGGCAC GCTCGGCCAG
CGGCTGTTCC CCGAGTGGAT GACCATCGAC GAACGCCCGC ACTTGAAGCA CGCCATGGGC
AGCTCGGCGT TCGACAGCGA TGGCCTGGCG ACCTACGCCA AGCCATTTGT GGAAAACGGC
GACCTGGTGT CCTACATATT GAGCACCTAT TCCGGTCGCA AGCTGGGCAT GCCGAGCACT
GCCAATGCGG GCGGCGTTCA TAACCTGTTC GTCACTCACG GGTCGGAAGA CCAGGCAGCG
CTGATCCGGC GCATGGGCCG TGGCCTGCTG GTCACCGAGT TGATGGGCAG CGGCTTGAAC
ATGGTGACCG GCGACTACTC CCGAGGCGCG GCAGGTTTCT GGGTCGAGAA TGGCGAGATT
CAGTTCCCGG TCCAGGAAGT GACTATTGCC GGCAATATGC GTGACATGTT CAAGCAGATT
GTCGCCGTTG GCAGCGATCT CGAACTGCGC AGCAACATCC GCACCGGCTC GGTCCTGATC
GAGCGCATGA CCGTCGCGGG TAGCTGA
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| Protein sequence | MSATQSVGPQ ALPELQEQVE QIIAEARRQG ASACEVAVSV DQGLSTSVRQ REVETVEFNR
DQGFGITLYV GQRKGSASTS ATGADAIRET VAAALAIAEH TSEDESSGLA DAALMAKEVM
DFDLYHTWDI TPEQAIEKAL ICEAAAFDAD SRIKNADGTT LNTHQGCRVY GNSNGFIGGY
ASTRHSLSCV MIAEGEGQMQ RDYWYDVNRK GELLVDAQSI GRKAALRAAS RLGARPVPTC
EVPVLFAAEL AGGLFGSFLG AISGGSLYRK SSFLEGTLGQ RLFPEWMTID ERPHLKHAMG
SSAFDSDGLA TYAKPFVENG DLVSYILSTY SGRKLGMPST ANAGGVHNLF VTHGSEDQAA
LIRRMGRGLL VTELMGSGLN MVTGDYSRGA AGFWVENGEI QFPVQEVTIA GNMRDMFKQI
VAVGSDLELR SNIRTGSVLI ERMTVAGS
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