Gene PSPTO_4459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4459 
SymbolsodA 
ID1186140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp5020901 
End bp5021512 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content56% 
IMG OID637395799 
Productsuperoxide dismutase, Mn 
Protein accessionNP_794213 
Protein GI28871594 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.974117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTATA CCTTGCCAGC ACTGCCTTAC GCCTACGATG CCCTTGAACC GCATATCGAT 
GCGCAAACAA TGGAAATCCA TTACACCAAA CACCACCAGA CCTACATCAA CAACCTCAAT 
GCGGCGGTGG AAGGCACGGA GTTTTCTGAC TGGTCGGTGG AGAAGCTGGT CGCCAGCGTC 
AAACAGCTCC CGGAAAACCT GCGTCCGGCA GTCATCAACC AGGGTGGCGG CCATGCCAAT 
CATTCGTTGT TCTGGGAAAT CATGGTGCCG GGCGGTGGAG GCTTGCCAAA GGGCCCGATC 
GCCGCGGCCA TTGACGAGCA ACTGGGTGGC TATGACAGCT TCAAAGAGGC GTTCACCAAA 
GCAGCGCTGA CCCGTTTCGG CAGCGGCTGG GCGTGGCTGA GCGTCACACC TGAAAAGAAA 
CTGGTGGTCG AGAGCAGCGG CAACCAGGAC AGCCCGCTGA TGAATGGCAA TACCCCCATT 
CTGGGGCTCG ATGTATGGGA GCACGCCTAC TATCTGCGCT ATCAGAACCG TCGTCCCGAA 
TACATCAATG CGTTTTACAA CGTGATCAAT TGGGATGAAG TTTCCCGACG TTACCAGGCT 
GCTCTGGCCT GA
 
Protein sequence
MSYTLPALPY AYDALEPHID AQTMEIHYTK HHQTYINNLN AAVEGTEFSD WSVEKLVASV 
KQLPENLRPA VINQGGGHAN HSLFWEIMVP GGGGLPKGPI AAAIDEQLGG YDSFKEAFTK 
AALTRFGSGW AWLSVTPEKK LVVESSGNQD SPLMNGNTPI LGLDVWEHAY YLRYQNRRPE 
YINAFYNVIN WDEVSRRYQA ALA