Gene PSPTO_4455 details

Gene Information

• Locus tag: PSPTO_4455
• Symbol: ptsN
• ID: 1186136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5019117
• End bp: 5019581
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637395795
• Product: PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: NP_794209
• Protein GI: 28871590
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.384019
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCTAA TTGAAAATAT CCTGACCCCC GGCCGTTCGC TCGTGAACGT GCCGGGAGGC 
AGCAAAAAGC GTGTACTCGA AGAAATCGCC AACCTGATCG GTCGTGAAGT ACAGGGCATG 
GATTCGGACA CGGTGTTTAC AAGCCTCGTT GCCCGCGAAA AGCTGGGATC GACCGGTTTC 
GGCAACGGTA TTGCCATCCC TCATTGCCGC CTCCCCGGCT GTGACGAACC CGTCAGTGCG 
GTCATTCACC TCGCCAACCC TATCGACTTC GATGCTATCG ATGGCGCACC AGTGGACCTG 
CTTTTCGTGT TGCTGGTCCC GCAAGCCGCC ACCGATGCAC ACCTGGAGCT GCTGCGCCAG 
ATCGCCAGCA TGCTTGACCG CGCCGATGTG CGTGAACGCC TACGCAGTGC CAAAAGCGGT 
GAAGCGCTTT ATCAAGTGGT GCTGGACGTG CAGAACGGCC ACTGA 

 

Protein sequence

MILIENILTP GRSLVNVPGG SKKRVLEEIA NLIGREVQGM DSDTVFTSLV AREKLGSTGF 
GNGIAIPHCR LPGCDEPVSA VIHLANPIDF DAIDGAPVDL LFVLLVPQAA TDAHLELLRQ 
IASMLDRADV RERLRSAKSG EALYQVVLDV QNGH