| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4449 |
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| Symbol | |
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| ID | 1186130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5014665 |
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| End bp | 5015204 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637395789 |
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| Product | phosphatase, YrbI family |
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| Protein accession | NP_794203 |
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| Protein GI | 28871584 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.295684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCG AAACAATGAC TCAGGACCTC ATGCAGCGCG GCAAAGCTAT CAAGCTGGCC
GTTTTCGACG TCGACGGCGT ACTGACTGAC GGCCGTCTTT ATTTCATGGA AGATGGCAGC
GAGATCAAGA CATTCAATAC GCTCGACGGC CAAGGCATAA AAATGCTGAT AGCCTCGGGC
GTGACTACTG CCATTATCAG TGGCCGCAAG ACGTCAATCG TCGAGCGCCG GGCAAAGAGC
CTGGGCATCG CGCACCTGTT TCAGGGTCGC GAAGATAAAC TGGTCGTACT GGATCAATTG
CTGGCAGAGT TGAAACTCGA TTACGAACAA GTCGCCTATC TGGGCGACGA TCTGCCAGAC
TTGCCCGTCA TTCGGCGTGT CGGCCTGGGC ATGGCGGTTG CCAATGCAGC AAGCTTTGTA
CGCGAGCATG CACACGGAAT AACCAGAGCG CGAGGCGGCG AAGGCGCTGC ACGCGAGTTC
TGCGAACTGA TTCTGAGTGC GCAAGGCAAC CTTGAAGCGG CTCACTCCGC CTATTTATAG
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| Protein sequence | METETMTQDL MQRGKAIKLA VFDVDGVLTD GRLYFMEDGS EIKTFNTLDG QGIKMLIASG
VTTAIISGRK TSIVERRAKS LGIAHLFQGR EDKLVVLDQL LAELKLDYEQ VAYLGDDLPD
LPVIRRVGLG MAVANAASFV REHAHGITRA RGGEGAAREF CELILSAQGN LEAAHSAYL
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