Gene PSPTO_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4448 
Symbol 
ID1186129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5013691 
End bp5014665 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content61% 
IMG OID637395788 
Productsugar isomerase, KpsF/GutQ 
Protein accessionNP_794202 
Protein GI28871583 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAT CCAGTGACCT GATCCAATCG GCGCAACGCA CCATTCGTCT CGAGATCGAA 
GCCATACAAG GCTTGCTCGA ACGTCTTGAC GGGGATTTCG TGCGCGCGTG CGAAATGATC 
CTCGCCAGCA AAGGTCGGGT TGTGGTGGTC GGCATGGGCA AGTCCGGGCA CGTGGGCAAA 
AAAATCGCCG CAACACTGGC GAGCACCGGC ACCACGTCTT TTTTTGTCCA CCCGGCCGAA 
GCCAGCCACG GTGACATGGG CATGATTACC CGTGACGACA TCATCCTGGC CCTGTCCAAC 
TCCGGCAGCA CCCACGAAAT TGTCACGCTG CTGCCGCTGA TCAAGCGTCT GGGCATCAAG 
ATGATCAGCC TGACCGGCGA CCCCGAGTCA ATTTTGGCCA GGGCCGCGGA CATCAACCTC 
AATGCCCATG TCGTGCACGA AGCCTGCCCG CTCAATCTGG CACCGACGTC GTCAACCACC 
GCTGCATTGG TCATGGGCGA TGCCCTGGCC GTGGCGCTGC TCGATGCACG GGGCTTCACT 
GCCGAAGATT TTGCATTTTC CCATCCGGGC GGTGCGCTAG GCCGGCGCCT GCTGCTCAAG 
GTCGAGAACG TCATGCACTC CGGTGACGCC CTGCCCAGCG TTCAGCGCGG CACCCTGCTA 
CGGGACGCGC TGCTGGAAAT GACCCGTAAG GGCCTGGGCA TGACTGCAAT TCTTGAAGCC 
GACGGCACGC TCGCCGGCAT ATTCACCGAC GGCGACTTGC GCAGAACACT GGATCGCCCG 
GTCGATATCC GCCAGACCAC CATTGATGAA GTCATGACCC TCCACGGCAA GACGGCGCAC 
GCAGACATGC TTGCCGCCCA GGCGCTGAAA ATCATGGAGG ACAACAAGAT CAGCGCTCTG 
GTCGTCGTGG ACCAGAACGA CAAGCCGGTG GGCGCATTCA ACCTGCAAGA CCTTTTGCGC 
GCAGGTGTCA TGTGA
 
Protein sequence
MNQSSDLIQS AQRTIRLEIE AIQGLLERLD GDFVRACEMI LASKGRVVVV GMGKSGHVGK 
KIAATLASTG TTSFFVHPAE ASHGDMGMIT RDDIILALSN SGSTHEIVTL LPLIKRLGIK 
MISLTGDPES ILARAADINL NAHVVHEACP LNLAPTSSTT AALVMGDALA VALLDARGFT 
AEDFAFSHPG GALGRRLLLK VENVMHSGDA LPSVQRGTLL RDALLEMTRK GLGMTAILEA 
DGTLAGIFTD GDLRRTLDRP VDIRQTTIDE VMTLHGKTAH ADMLAAQALK IMEDNKISAL 
VVVDQNDKPV GAFNLQDLLR AGVM