Gene PSPTO_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4447 
Symbol 
ID1186128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5012577 
End bp5013386 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID637395787 
Producttoluene tolerance ABC transporter, ATP-binding protein, putative 
Protein accessionNP_794201 
Protein GI28871582 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTG ATGACGCCTA TGCGGTCGAG TTGAAAGGTG TGTCTTTCAA ACGCGGTACG 
CGCAGCATTT TTAATAACGT CGATATTCGT ATTCCGCGGG GCAAGGTCAC CGGGATCATG
GGGCCGTCGG GCTGTGGCAA GACTACCTTG CTGCGCCTGA TGGGCGCTCA GTTGCGCCCG
AGCGAAGGGC AGGTGCTGGT CAACGGCCAG AATCTGCCGG AGCTGTCGCG CAGTGATCTG
TTCGACGCGC GCAAGCAGAT GGGCGTGTTG TTCCAGAGCG GGGCGCTGTT CACCGATCTG
GACGTTTTCG AAAACGTCGC CTTTCCGTTG CGCGTGCACA CCGAGCTGCC GGAAGAAATG
ATCCGTGACA TCGTGCTGCT CAAGCTTCAG GCGGTAGGCC TGCGCGGTGC GGTCGAGCTG
ATGCCGGACG AACTGTCGGG TGGCATGAAG CGCCGCGTCG CACTAGCCCG TGCAATTGCT
CTCGACCCAC AGATCCTCAT GTATGACGAG CCCTTTGTGG GGCAGGACCC GATCGCCATG
GGCGTGCTGG TACGCCTGAT CCGCCTGCTC AACGATGCGC TGGGTATCAC CAGTATCGTC
GTGTCCCATG ATCTCAGCGA GACAGCGAGC ATTGCCGACT ATCTCTATGT CGTGGGCGAC
GGGCAGGTGC TGGGGCAGGG CACGCCTGAG GAACTGATGT CCTCGGACAA CCCACGTATT
CGTCAATTCA TGACCGGCGA ACCTGATGGC CCTGTGCCGT TCCATTATCC GGCGCCGGAT
TTTCGCGAAG ATCTTTTGGG GAAGCGCTGA
 
Protein sequence
MSPDDAYAVE LKGVSFKRGT RSIFNNVDIR IPRGKVTGIM GPSGCGKTTL LRLMGAQLRP 
SEGQVLVNGQ NLPELSRSDL FDARKQMGVL FQSGALFTDL DVFENVAFPL RVHTELPEEM
IRDIVLLKLQ AVGLRGAVEL MPDELSGGMK RRVALARAIA LDPQILMYDE PFVGQDPIAM
GVLVRLIRLL NDALGITSIV VSHDLSETAS IADYLYVVGD GQVLGQGTPE ELMSSDNPRI
RQFMTGEPDG PVPFHYPAPD FREDLLGKR