| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4438 |
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| Symbol | hisD |
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| ID | 1186119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5006428 |
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| End bp | 5007774 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395778 |
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| Product | histidinol dehydrogenase |
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| Protein accession | NP_794192 |
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| Protein GI | 28871573 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.245239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGC CCACTGCAAT TCGCCGACTC GACGCTGCTG ACCCGGATTT CGCGCGCCAT
TTGGATCATC TGCTGAGCTG GGAAAGTGTG TCTGACGACT CGGTCAACCA GCGCGTGCTC
GACATCATCA AGGCCGTGCG TGAGCGTGGC GACGCAGCAC TTGTTGAATT AACTCAGAAA
TTCGACGGCC TGCAGGTCGC TTCGATGGCT GAGCTGATCC TTCCCCGCGA ACGTCTGGAG
CTTGCGTTGA CGCGCATTAC GCCGGTTCAG CGCCAGGCAC TGGAAAAAGC CGCCGAGCGT
GTGCGCAGCT ACCACGAGAA GCAGAAGCAG GACTCCTGGA GCTATACCGA GGCCGACGGC
ACGGTGTTGG GTCAGAAAGT CACGCCGCTG GATCGAGCCG GCTTGTACGT GCCCGGCGGC
AAGGCGTCTT ACCCGTCGTC GGTGTTGATG AATGCCATTC CGGCGAAAGT GGCGGGGGTG
ACCGAGGTGG TCATGGTCGT GCCGACGCCG CGTGGCGAAA TCAACGAGCT GGTGTTGGCG
GCAGCCTGTA TCGCCGGCGT TGACCGTGTG TTCACCATTG GGGGCGCGCA GGCTGTGGCG
GCCCTGGCCT ACGGCACTGA GAGCGTACCG AAGGTCGATA AGGTCGTCGG CCCTGGCAAT
ATCTATGTCG CCACGGCCAA GCGCCATGTG TTCGGGCAGG TCGGCATCGA CATGATTGCC
GGGCCTTCCG AGATTCTGGT GGTGTGCGAC GGCCAGACCG ATCCTGACTG GATCGCCATG
GACCTGTTCT CCCAGGCCGA GCACGACGAA GATGCTCAAG CCATTCTGGT CAGCCCGGAC
GCCGAATTCC TCGACAAGGT TGCCGCGAGC ATCACGCGTT TGCTGCCGAC CATGGCGCGA
GCAGCCATTG TCGAAACATC GATCAATGGC CGTGGTGCGC TGATCAAGGT GGCGGACATG
GCGCAAGCCA TCGAAGTGGC CAATCGCATT GCGCCCGAGC ACCTCGAGTT GTCCGTCGCC
GATCCTGAGG CCTGGCTGCC GCACATTCGT CACGCCGGCG CGATCTTCAT GGGTCGTCAC
ACCTCCGAGG CGCTGGGCGA CTACTGCGCC GGTCCCAACC ACGTATTGCC GACCTCCGGT
ACGGCGCGGT TTTCCTCGCC ATTGGGCGTT TACGACTTCC AGAAGCGTTC GTCGATCATC
TATTGCTCGC CAGAGGGCGC GTCCGAACTG GGCAAGACCG CGTCGGTACT GGCCCGTGGC
GAATCCTTGA GCGGCCACGC CCGCAGCGCC GAATACCGCA TCACTGATCT TGACTGGAAA
ACTGGCAACC TTGAGGAAGG CAAATAA
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| Protein sequence | MTTPTAIRRL DAADPDFARH LDHLLSWESV SDDSVNQRVL DIIKAVRERG DAALVELTQK
FDGLQVASMA ELILPRERLE LALTRITPVQ RQALEKAAER VRSYHEKQKQ DSWSYTEADG
TVLGQKVTPL DRAGLYVPGG KASYPSSVLM NAIPAKVAGV TEVVMVVPTP RGEINELVLA
AACIAGVDRV FTIGGAQAVA ALAYGTESVP KVDKVVGPGN IYVATAKRHV FGQVGIDMIA
GPSEILVVCD GQTDPDWIAM DLFSQAEHDE DAQAILVSPD AEFLDKVAAS ITRLLPTMAR
AAIVETSING RGALIKVADM AQAIEVANRI APEHLELSVA DPEAWLPHIR HAGAIFMGRH
TSEALGDYCA GPNHVLPTSG TARFSSPLGV YDFQKRSSII YCSPEGASEL GKTASVLARG
ESLSGHARSA EYRITDLDWK TGNLEEGK
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