| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4434 |
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| Symbol | |
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| ID | 1186115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5002112 |
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| End bp | 5002870 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395774 |
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| Product | hypothetical protein |
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| Protein accession | NP_794188 |
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| Protein GI | 28871569 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0327] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00125483 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTG CTCTGAGCAC CCTCGTCGAA GAAGCCGACC GCTATCTGAA CAGTGCCCGT
ATTCAGGATT ATTGCCCCAA CGGGCTGCAG GTCGAAGGCC GGCCGCAGGT GATGCGCATC
GTCAGCGGCG TGACCGCCAG CCAGGCATTG CTGGACGCCG CCGTGGAGGC TCAGGCTGAT
CTGATCCTGG TGCACCACGG CTATTTCTGG AAGGGCGAAA ACCCCTGTGT CGTCGGCATG
AAGCAGCGTC GCCTGAAAAC CCTGCTCAAA CACGACATCA GCCTGCTTGC CTATCACCTG
CCGCTGGACG TGCACCCTGA AGTGGGTAAC AACGTGCAAC TGGCGCGTCA ACTGGACATC
ACTGTCGAAG GCCCGCTGGA CCCCGAAAAC GCGCGTGTGG TCGGCTTGAT CGGCTCGTTG
TCCGAACCCA TGACCGCGCG GGATTTCGCC CGTCGCGTGC AGGACGCTCT GGGGCGTGAG
CCCTTGCTCA TCGAAGGCAG CCAGATGATT CGCCGGGTTG GCTGGTGCAC CGGTGGCGGC
CAGGGTTACA TCGATCAGGC GGTGCTGGAA GGCGTCGATC TGTTTCTGAG TGGCGAGGCG
TCGGAGCAGA CCTTTCACAG CGCGCGCGAG AATGACATCA GCTTCATCGC TGCCGGTCAC
CACGCCACCG AGAGGTATGG CGTTCAGGCG CTGGGCGATT ACCTGGCTCG TCGTTTCGCG
CTGGAGCATA TCTTCATCGA TTGCCCCAAC CCGATCTGA
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| Protein sequence | MAVALSTLVE EADRYLNSAR IQDYCPNGLQ VEGRPQVMRI VSGVTASQAL LDAAVEAQAD
LILVHHGYFW KGENPCVVGM KQRRLKTLLK HDISLLAYHL PLDVHPEVGN NVQLARQLDI
TVEGPLDPEN ARVVGLIGSL SEPMTARDFA RRVQDALGRE PLLIEGSQMI RRVGWCTGGG
QGYIDQAVLE GVDLFLSGEA SEQTFHSARE NDISFIAAGH HATERYGVQA LGDYLARRFA
LEHIFIDCPN PI
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