Gene PSPTO_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4430 
Symbol 
ID1186111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4997784 
End bp4998413 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content59% 
IMG OID637395770 
Producthypothetical protein 
Protein accessionNP_794184 
Protein GI28871565 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.104862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAAA CCCCATTTTT TATCGATGGC CCAGAAGGCC AGCTTGAAGC GCTGTATCAG 
GATGTGCCGG ATGCCAGAGG CGTGGCGCTG ATCTGCCATC CTAACCCGAT CCAGGGTGGC 
ACGATGCTCA ATAAAGTCGT CTCGACGTTG CAGCGTACCG CACGCGACCA GGGTTTGATC 
ACTCTGCGCT TCAATTATCG CGGCGTCGGT GCCAGTGCCG GTACATCGGT GGCCGGGCCC 
GGCGAAATCG ACGATGCCCA GGCCGCTGCC CAATGGCTGC GGGCGCAGCA TCCGGATTTG 
CCGATGACCC TGTTCGGTTT TTCGTTCGGC GGTTATGTCG CTGCCAACCT GGGCGGTCGC 
CTCGAAGCAC AGGGCGAAAA GCTCACGCAT TTGTTTCTGA TTGCTGCAGC TGCCTCGCGT 
CTCCAGGATC AGAGCGTATT GCCACACGCC TGCCCGCTGA CGATCATTCA GCCAGAGGCC 
GACGAAGTCA TCGACCCTGA AACGGTCTAT GCATGGTCGG CCGCGCTGCA ACGCCCCCAT 
GAGCTGCTGA AAGTGGCAGA ATGCGGACAC TTTTTTCACG GCAAGTTGAC TGATCTGAAA 
GATCTGCTCC TGCCGCGACT CCCCAACTGA
 
Protein sequence
MRETPFFIDG PEGQLEALYQ DVPDARGVAL ICHPNPIQGG TMLNKVVSTL QRTARDQGLI 
TLRFNYRGVG ASAGTSVAGP GEIDDAQAAA QWLRAQHPDL PMTLFGFSFG GYVAANLGGR 
LEAQGEKLTH LFLIAAAASR LQDQSVLPHA CPLTIIQPEA DEVIDPETVY AWSAALQRPH 
ELLKVAECGH FFHGKLTDLK DLLLPRLPN