| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4428 |
|---|
| Symbol | |
|---|
| ID | 1186109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4995238 |
|---|
| End bp | 4996332 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637395768 |
|---|
| Product | ATPase, putative |
|---|
| Protein accession | NP_794182 |
|---|
| Protein GI | 28871563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1485] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.807531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCC TAGAACGATA TCAAGCTGAT CTGAAACGCC CGGACTTCTT CCATGATTCC
GCGCAGGAAA ACGCTGTGCG CCATTTGCAG CGCCTTTATG AGGATCTGGT CGCCGCTCAC
GACAGCAAGC CAGGCCTGTT CGGCAAGCTG TTTGGCAAGA AAGAGCCGAC CCTGGTCAAG
GGCCTGTATT TCTGGGGTGG TGTGGGTCGC GGCAAGACTT ATCTGGTCGA CACGTTCTTT
GAAGCGCTGC CGTTCCAGGA CAAGGTCCGT ACGCACTTCC ACCGCTTCAT GAAGCGCGTG
CACGAAGAGA TGAAGACCCT CAAGGGCGAA AGAAACCCGC TGACGATCAT CGCCAAGCGT
TTTTCCGACG AGGCGCGGGT CATCTGCTTC GACGAATTCT TCGTTTCCGA CATCACCGAC
GCCATGATCC TCGGCACGCT GATGGAAGAG CTGTTCAAGA ATGGCGTGAC CCTGGTCGCG
ACGTCCAACA TCGTTCCGGA CGGCCTGTAC AAGGACGGTC TGCAGCGAGC GCGCTTTCTG
CCAGCCATTG CGCTGATCAA GCAGAACACC GACATCGTCA ACGTCGACAG TGGCGTTGAC
TATCGTCTGC GTCACCTTGA GCAGGCTGAG CTGTTCCATT TCCCGCTCAA CGACGCCGCG
CAGGAAAGCA TGCGCAAAAG CTTCAAGGCG CTGACCCCGG ATTGCGCAGA AACCGTCGAA
AACGACGTGT TGATGATCGA GAATCGCGAG ATCCGTGCCC TGCGTACCTG TGACGACGTG
GCATGGTTCG ACTTCCGCGA ACTGTGCGAC GGGCCGCGCA GCCAGAACGA TTACATCGAA
CTGGGCAAGA TTTTCCACGC GGTGCTGCTC AGCGGCGTCG AGCAGATGGA CGTCTCCACC
GACGACATCG CCCGGCGCTT CATCAACATG GTCGACGAGT TCTACGATCG CAACGTCAAG
CTGATCATCT CGGCCGAGGT TGAATTGAAG GACCTGTACA CCGGTGGCCG GTTGATGTTC
GAGTTTCAGC GCACCTTGAG CCGCCTGCTG GAAATGCAAT CCCACGAGTT TCTCTCGCGG
GCGCATAGGC CCTAG
|
|---|
| Protein sequence | MTPLERYQAD LKRPDFFHDS AQENAVRHLQ RLYEDLVAAH DSKPGLFGKL FGKKEPTLVK
GLYFWGGVGR GKTYLVDTFF EALPFQDKVR THFHRFMKRV HEEMKTLKGE RNPLTIIAKR
FSDEARVICF DEFFVSDITD AMILGTLMEE LFKNGVTLVA TSNIVPDGLY KDGLQRARFL
PAIALIKQNT DIVNVDSGVD YRLRHLEQAE LFHFPLNDAA QESMRKSFKA LTPDCAETVE
NDVLMIENRE IRALRTCDDV AWFDFRELCD GPRSQNDYIE LGKIFHAVLL SGVEQMDVST
DDIARRFINM VDEFYDRNVK LIISAEVELK DLYTGGRLMF EFQRTLSRLL EMQSHEFLSR
AHRP
|
|---|
| |