| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4427 |
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| Symbol | |
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| ID | 1186108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4994153 |
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| End bp | 4995163 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395767 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_794181 |
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| Protein GI | 28871562 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.326492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATCC AACACGCCAC TCTTCTGCGC CGCGTCAGCA TCCTGACCAC CGACAAAATG
TTTGCCTCGA CCGTCATGCA GGCCAAGGAC TTCTTCCATC TGGCCAGTCT GCGCTACAGC
AAACAATTGG GTCAGGGCCT GATACCGGCC TTCGAAACGC GCCTGGTCAG CCCGGACGGG
CTACCGGTCA GCAGCTTCAG CGACGTCACC CTGCCGGTCG ACGGCGCGCT GTGCCAGAGC
GATATCATCG TCATTCCTGC CTTCTGGGAT GATTTTGAAA CCCTGTGCCA GCGCTACCCA
CAGATCCTCC CCTGGTTGCG CGAGCAACAC GCCAATGGCG CCGTGCTCTG CGGCGAGGCC
ACCGGTGTGT ATTGGCTGGC CGAGGCCGGG CTGCTTGATG GCAAGGAAGC CACCACTTAC
TGGCGATTCT TCACTGCCTT CGCCGAGCGC TATCCCAAGG TGCTGCTCAA TCAGGAAAAA
CACCTGACTG ACGCCGATAA CGTGTATTGC GCAGGAGGTA CGACATCAGC CTGCGACCTC
TACATCTACC TGATCGAGCG CTTCTGTGGC GCCAACGTCG CCCAGGCCGT CGCCCGCGAC
ATTCTCTACG AAGTGCGCCG CACGTATGCG CCTGGGCGAA TCGGTTTTGG CGGGCAGAAA
CTGCATCAGG ACGTGGTGAT TCTGCAGATC CAGCATTGGC TTGAAGAGCA CTTCGCCGAC
AAATTCCGCT TTGAAGACGT CGCCCGAGAG CACGGCATGA GCATTCGCAA TTTCATGCGC
CGCTTCCAGA CCGCAACGGG CGACAAGCCA CTGCACTACC TGCAGCGGCT GCGGATCGAA
ACGGCGAAGG GGTTGCTGTC AGGCACGCGC AAGAGCATCA AGACCATCAG CTACGAAGTC
GGCTACGACG ACGCCAGCTT CTTCGCCCGC CTCTTCCGCC AGCACACCGA GCTGTCACCC
AACCAGTACC GGCAACAGTT CGAGAGCCTC AAGCTGCAAG GGGGGAGCTG A
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| Protein sequence | MPIQHATLLR RVSILTTDKM FASTVMQAKD FFHLASLRYS KQLGQGLIPA FETRLVSPDG
LPVSSFSDVT LPVDGALCQS DIIVIPAFWD DFETLCQRYP QILPWLREQH ANGAVLCGEA
TGVYWLAEAG LLDGKEATTY WRFFTAFAER YPKVLLNQEK HLTDADNVYC AGGTTSACDL
YIYLIERFCG ANVAQAVARD ILYEVRRTYA PGRIGFGGQK LHQDVVILQI QHWLEEHFAD
KFRFEDVARE HGMSIRNFMR RFQTATGDKP LHYLQRLRIE TAKGLLSGTR KSIKTISYEV
GYDDASFFAR LFRQHTELSP NQYRQQFESL KLQGGS
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