| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4423 |
|---|
| Symbol | sspB |
|---|
| ID | 1186104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4991593 |
|---|
| End bp | 4992006 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637395763 |
|---|
| Product | stringent starvation protein B |
|---|
| Protein accession | NP_794177 |
|---|
| Protein GI | 28871558 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2969] Stringent starvation protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.219018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCCA GTCGCCCTTA TCTTGTTCGC GCTCTTTATG AGTGGATCGT CGATAACGAT
TGCACCCCGC ATGTGCTGGT CAATGCGGAA TACCCATCGG TGCAGGTCCC TCAGGGCTTT
GCCAATGATG GGCAGATTGT CCTGAACGTT TCGCCAAGCG CAGTGCGTCA TCTGCACATG
GACAACGATG CAGTCAGCTT TGAAGGCCGC TTCGGCGGTG TGCCGCACAC ACTGTACGTG
CCTGTGGCTG CCATCCTGGG CATTTATGCC CGCGAGAATG GTCAGGGTAT GGTGTTCGAC
CTGGAGCCTT CCCTTGAGGA AGGTGAAGAG ATCGAGACCG AAGATGACAC GCCGCCACCC
GACAGCGAGC CACCGCGCCC AAGCGGCAGG CCAAGCCTGA AGGTCGTGAA GTAA
|
|---|
| Protein sequence | MNSSRPYLVR ALYEWIVDND CTPHVLVNAE YPSVQVPQGF ANDGQIVLNV SPSAVRHLHM
DNDAVSFEGR FGGVPHTLYV PVAAILGIYA RENGQGMVFD LEPSLEEGEE IETEDDTPPP
DSEPPRPSGR PSLKVVK
|
|---|
| |