| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4422 |
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| Symbol | |
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| ID | 1186103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4990954 |
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| End bp | 4991532 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395762 |
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| Product | lipoprotein, putative |
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| Protein accession | NP_794176 |
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| Protein GI | 28871557 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.303803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCTA ATCGTCTTAG CCTACTGGTT CTGACACTGT GCCTGAGCGT CACCGGATGC
AGTTCTGTGC TGACGGCCGC TCGCGACAAG CCGATCGAAG ATGATCGCGG CACCCGCACC
TTCGGCAGCA AGATCGATGA CTCACTGATC GAAACCAAGG CAGCCGTCAA CATCTCCAAG
GCCAACCCTG ACCTTGCCGA CGGCTCGCAC ATTGTCGTGA CCAGCTTCAA CGGCATCGTC
CTGCTCGCAG GCCAGACGCC ACGCGCCGAC CTCAAGGCAA TCGCCGAACA GGCCGCCGCT
TCGGTCCAGC GCGTCAAGAA GGTCAACAAC GAGCTGCAGG TCATGGCACC GTCATCCCTG
CTGGCGCGTA ACAACGATGC CTGGCTGACG ACCAAGATCA AAAGCCAGAT GATCGCCGAC
GCGTCGATTC CCGGCTCGCG CATCAAGGTC GTGACCGAGA ACGGCATCGT GTTCCTGCTG
GGCCTGGTGA CTCAGGATGA AGCCAATCGC GCCACCAACC TGGTGCAGAG CGTCTCGGGC
GTGCAGAAGA TCGTCAAACT GTTCGAATAC ATCGACTGA
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| Protein sequence | MTPNRLSLLV LTLCLSVTGC SSVLTAARDK PIEDDRGTRT FGSKIDDSLI ETKAAVNISK
ANPDLADGSH IVVTSFNGIV LLAGQTPRAD LKAIAEQAAA SVQRVKKVNN ELQVMAPSSL
LARNNDAWLT TKIKSQMIAD ASIPGSRIKV VTENGIVFLL GLVTQDEANR ATNLVQSVSG
VQKIVKLFEY ID
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