Gene PSPTO_4421 details

Gene Information

• Locus tag: PSPTO_4421
• Symbol: gmhA
• ID: 1186102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4990370
• End bp: 4990957
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637395761
• Product: phosphoheptose isomerase
• Protein accession: NP_794175
• Protein GI: 28871556
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0279] Phosphoheptose isomerase
• TIGRFAM ID: [TIGR00441] phosphoheptose isomerase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.440249
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATCCC GAATTCGCCG GCTGTTCCAG GCCAGCATCG ACACCAAGCA ACAGGCGATG 
GAAGTCCTTG CACCCTTTAT CGAGCAAGCC AGCCAGGTCA TGGTCAATGC CCTGCTCAAC 
GAAGGCAAAA TGCTTGCGTG CGGCAACGGC GGATCGGCTG GCGATGCACA GCACTTTTCC 
TCGGAAATGC TCAATCGCTT CGAGCGCGAA CGGCCCAGCC TGCCGGCCAT TGCGCTGACT 
ACCGACAGCT CGACGATCAC CTCGATTGCC AACGACTACA GCTATAACGA AATCTTCTCC 
AAACAGATCC GCGCACTGGG CCAACCAGGC GATGTGCTGC TGGCGATTTC CACCAGCGGC 
AACTCGGCGA ATATTATTCA GGCCATCCAG GCCGCACATG ATCGCGAAAT GATTGTCGTA 
GCATTGACGG GACGCGACGG TGGCGGCATG GCTTCGCTGC TATTGCCCGA GGACGTGGAG 
ATCCGCGTAC CGGCCAACGT CACGGCACGC ATACAAGAAG TCCATCTGCT GACGATCCAT 
TGCCTTTGCG ATTTGATCGA CAGCCAACTG TTCGGGAGTG AAGAATGA 

 

Protein sequence

MQSRIRRLFQ ASIDTKQQAM EVLAPFIEQA SQVMVNALLN EGKMLACGNG GSAGDAQHFS 
SEMLNRFERE RPSLPAIALT TDSSTITSIA NDYSYNEIFS KQIRALGQPG DVLLAISTSG 
NSANIIQAIQ AAHDREMIVV ALTGRDGGGM ASLLLPEDVE IRVPANVTAR IQEVHLLTIH 
CLCDLIDSQL FGSEE