| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4419 |
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| Symbol | |
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| ID | 1186100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4987997 |
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| End bp | 4989811 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637395759 |
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| Product | lipoprotein, putative |
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| Protein accession | NP_794173 |
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| Protein GI | 28871554 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0598181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCTT GTCTGCGGCT GCTCTCTGCC CTCTGCCTCG CTGCCCTTCT CGCAGCGTGT
GCAAGCTCGC CCTCGTCCAG TCTTGGCGAG CTGCCTCGAA CCCCTGACGC CAGCATCGAG
CAACTGCTTG ATCAGGCCGC CAACGCAAAA ACACCCGAGC AGGCCGCTAC GCTGCGCTTG
AGTGCTGCCG ACCTGGCCAA CCGCCAGAAC GATGCAGGGC GCGCTGCGCA GATCCTCGGG
CAGGTGCAAC TCGATCAACT CAAGCCAGGC CTGCAGGTTT TTGCCAGCAC GCTGTCCGCC
GAACTGGCGA TGGGCCGCAA TCAACCCAAG GCAGCGTTGA CCGCCCTGAA TCACCCAAGC
ATGCAGCGCC TGGGCGAACT GTCGGTCGAG CAGCAGGTGC GTACCCACAT GGTCAAGGCG
CGTGCGCTGG AAGCCGATGG TCAGGCGCTG GCAGCGGTTC ATGAGCGGGT TTACGCAGGT
CCGCTGTTGC AGGGCGCAGA TGCAAGCGCC AACAACGATG CGATCTGGAC ACTGGTTTCC
GCCCTTCCGG CCGATCAGTT GCAAAGCACA GCGACCGACG ACATGGGCGG CTGGCTGAAT
CTGGCTCGCT CGATCAAAGG TGCCGGTACG CTTGAGCAAC AACAGGCTGC CATCGATAAC
TGGAAAGCCC AGAACCCGAA ACACCCTGCC GCACTGCAAT TGCCTACCGC CCTTGCACAA
CTGCGCGCCC TGACCAGCGA GCCGATCACC AAAATCGCCC TGCTGCTGCC ACAGGATGGG
CAACTGGCCT CAGTGGCCAA GGCGTTGCGC GACGGCTTCA TGGCCGCGCA CTTTCAGGCG
CAGCAGGCAG GGCAAAATCC CCCTGCCATT CAAGTGTTCG ACAGCTCGCG CGTGACCTCG
ATGGATGAGT TCTACCGTCA GGCCCAGGCT GCTGGCGCAC AGCTGGTGGT CGGCCCACTG
GAAAAGAATC TCGTCAAACA GCTGAACAGC CGTCAGCAAC TGCCGATCAC CACCCTGGCA
CTCAATTACA GCGACACCAG CACCGAAGGC CCTGCGCAGC TGTATCAGTT CGGCCTGGCC
GCAGAAGACG AAGCCCGCGA AGTGGCACGT CGCGCCTGGG CAGACGGCAA GCGCAGCGCT
GTCGCCATGG TTCCGAAGGG CGAATGGGGC GACCGCGTTC TGGATGCCTT CCGCAAGAGC
TGGCAGGCCA AGGGCGGCAC GCTGATCGCC GCCGAGCACG TTGATCAACC TGTGGAGCTG
GCGCAACAGG TCGCCGACCT GTTCCAGCTG CGTAACAGCG AAGGCCGCGC CCAGCGCCTG
CAAAGCACTG CCGGCACCCA GGTCGCCGCC CAGCCAAGCC GTCGCCAGGA CATCGACTTC
ATGTTCCTCG CCGCCACCCC GCAGCAGGCG CAGCAGATCA AGCCGACCAT GGTCTTCCAG
TACGCTGGCG ACGTTCCGGT CTACGCCACC TCGCACCTGT TCACCAACAG CAATGACCAT
GCGCAGTACA TGGACCTCAA TGGCGTACGC TTCTGCGAAA CCCCTTGGCT GCTGAATGCC
GAAGACCCAC TTCGCCAGCA GGTCACTGCC CAATGGCCAC AGGCCGCCGG CAGCCTCGGC
CGACTCTACG CAATGGGCAT CGACGCCTAT CGCCTGGCGC CACGCCTTGC CCAGCTCAAG
GCGATGCCTG ACAGCCGCAT TGACGGCCTG TCGGGCAGCC TGAGCATCAA TCCGGGCCGT
CGCGTCGAGC GTCAGTTGCC TTGGGCCGAG TTCGTTGATG GCAAGATCCA GCGCCTGCCG
GACACCGCAC CTTGA
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| Protein sequence | MIACLRLLSA LCLAALLAAC ASSPSSSLGE LPRTPDASIE QLLDQAANAK TPEQAATLRL
SAADLANRQN DAGRAAQILG QVQLDQLKPG LQVFASTLSA ELAMGRNQPK AALTALNHPS
MQRLGELSVE QQVRTHMVKA RALEADGQAL AAVHERVYAG PLLQGADASA NNDAIWTLVS
ALPADQLQST ATDDMGGWLN LARSIKGAGT LEQQQAAIDN WKAQNPKHPA ALQLPTALAQ
LRALTSEPIT KIALLLPQDG QLASVAKALR DGFMAAHFQA QQAGQNPPAI QVFDSSRVTS
MDEFYRQAQA AGAQLVVGPL EKNLVKQLNS RQQLPITTLA LNYSDTSTEG PAQLYQFGLA
AEDEAREVAR RAWADGKRSA VAMVPKGEWG DRVLDAFRKS WQAKGGTLIA AEHVDQPVEL
AQQVADLFQL RNSEGRAQRL QSTAGTQVAA QPSRRQDIDF MFLAATPQQA QQIKPTMVFQ
YAGDVPVYAT SHLFTNSNDH AQYMDLNGVR FCETPWLLNA EDPLRQQVTA QWPQAAGSLG
RLYAMGIDAY RLAPRLAQLK AMPDSRIDGL SGSLSINPGR RVERQLPWAE FVDGKIQRLP
DTAP
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