Gene PSPTO_4414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4414 
Symbol 
ID1186095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4982681 
End bp4984408 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content60% 
IMG OID637395754 
Productpenicillin-binding protein 
Protein accessionNP_794168 
Protein GI28871549 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00243453 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTG AGGGCGCACT GTATCCTTGG CGTTTTCGCG TAGTCGTGGG TCTTCTGGTC 
TCCCTGGTGC TTGCCATTTG CTGGCGCATC GTCGATCTGC AGGTCATCGA CCACACCTTC
CTCAAGGAGC AGGGTGACGC GCGCAGCCTT CGGCATATTC CGATTCCGGC TCACCGTGGC
CTGATCACCG ACCGTAATGG CGAACCGCTT GCAGTTAGCA CGCCGGTTAC CACGCTGTGG
GCCAACCCGC GCGAAATGCA GCAGGACAAG TCCAAGTGGC CGATGCTTGC AGCGGCTACA
GGTCAGGATC TCAAAGCGCT GACCGATCGC CTGGAATCGC AGGCCACCAA GGAGTTCATT
TACCTGGTTC GCGGCATGAC GCCGGAGCAG GGGCAGGCGG CGCTGGATTT GAAAGTCCCC
GGCGTTTATG GCATCGAAGA ATTCCGCCGT TTCTACCCGG CAGGTGATGT GACCGCGCAC
ATGGTTGGTT TTACTGACCT TGATGATCAC GGTCGCGAAG GTGTCGAGCT GGCGTATGAC
GACTGGCTTG CCGGAGTGCC CGGCAAGCGG CAGGTCATCA AGGACCGGCG CGGCCGGCTG
ATCAAGGACG TTCAGGTGAC CAAGAATGCC AAGGCCGGAA AGACCTTGGC TTTGTCTATT
GACCTGCGCC TGCAATACCT GGCCACCCGT GAACTGCGTA ACGCCATCGT TGAAAACGAA
GCGAAGGCAG GCAGCATGGT GATCATGGAC GTCAAGACCG GCGAGGTTCT GGCGATGGTC
AACCAGCCGA CTTACAACCC GAACAACCGC CGCACCATGG TGCCAGCCGC CATGCGCAAC
CGGGCGATCA TTGACGTGTT CGAACCAGGT TCGACCATGA AGCCGATCTC CATGACCGCA
GCGCTGGACA GCGGCCGTTG GAAACCGACC GACAAGGTCG AGGTTTATCC GGGCACCCTG
CAGATCGGCA AATACACGAT TCGCGACGTC ACCAAGACCG AAGGCCCGGT GCTCGACCTG
ACCGGCATCC TGATCAACTC CAGTAACGTC GGGATGAGTA AAGTCGCGTT CGACGTAGGC
GGCGAAGCTA TTTTCCGCGC CATGCAGCGC GTCGGCTTCG GTCAGTACAC TGGCCTGGGC
TTCCCGGGCG AGCGCGTCGG CAACCTGCCT AACTACCGCG AATGGCGCAA GGCAGAAACC
GCCACGCTGT CTTATGGCTA CGGTCTGTCG GTAACGGCCC TGCAACTGGT GCATGCCTAC
GGCGCGCTGG CTAACAATGG CCGGATCGTA CCGCTGACCA TTTTGAAAAC AGACAAAGAG
CCCGAGTCGA CTCAGGCTAT TCCCGAGAAA ACCGCCAAGA CCCTGCAAGG TATGTTGCAG
CAGGTGATCG AAGACCCGCG CGGCGTGTAT CGCGCCCGTG TGCCGTCCTA TCACGTCGGC
GGTAAGAGCG GTACAGCACG TAAGACGTCG ATCGGCACCA AGGGTTATGC GGAGAACTCC
TACCGCTCCC TGTTCGCCGG TTTCGGCCCC ATGAGTAACC CGCGTTACGC CATCGTCGTG
GTCATCGACG AGCCGAGCAA GGGCGGTTAC TACGGCGGTC TGGTTTCGGC TCCGGTGTTC
AGCAAGGTCA TGTCCGGCAC GTTGCGTCTG ATGAACGTGA CGCCAGACAA CCTTGCGCCA
CCGGAACAAG TCAATGTCGC ACCTGCAGCC AAAGGAGGGC GTGGTTGA
 
Protein sequence
MKLEGALYPW RFRVVVGLLV SLVLAICWRI VDLQVIDHTF LKEQGDARSL RHIPIPAHRG 
LITDRNGEPL AVSTPVTTLW ANPREMQQDK SKWPMLAAAT GQDLKALTDR LESQATKEFI
YLVRGMTPEQ GQAALDLKVP GVYGIEEFRR FYPAGDVTAH MVGFTDLDDH GREGVELAYD
DWLAGVPGKR QVIKDRRGRL IKDVQVTKNA KAGKTLALSI DLRLQYLATR ELRNAIVENE
AKAGSMVIMD VKTGEVLAMV NQPTYNPNNR RTMVPAAMRN RAIIDVFEPG STMKPISMTA
ALDSGRWKPT DKVEVYPGTL QIGKYTIRDV TKTEGPVLDL TGILINSSNV GMSKVAFDVG
GEAIFRAMQR VGFGQYTGLG FPGERVGNLP NYREWRKAET ATLSYGYGLS VTALQLVHAY
GALANNGRIV PLTILKTDKE PESTQAIPEK TAKTLQGMLQ QVIEDPRGVY RARVPSYHVG
GKSGTARKTS IGTKGYAENS YRSLFAGFGP MSNPRYAIVV VIDEPSKGGY YGGLVSAPVF
SKVMSGTLRL MNVTPDNLAP PEQVNVAPAA KGGRG