Gene PSPTO_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4393 
Symbol 
ID1186074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4957313 
End bp4957792 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content57% 
IMG OID637395733 
Producthypothetical protein 
Protein accessionNP_794147 
Protein GI28871528 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCGT TCGACGTAGT GTCCGAATTG GATAAACACG AAGTCACGAA TGCCGTCGAC 
AACGCCATCA AAGAACTGGA CCGTCGCTAT GACCTTAAAG GCAAAGGCAC GTTCGAGTTC
AAGGAACTGA CCGTTACGCT GACCGCCGAA GCCGACTTCC AGCTGGAAGC GATGATCGAG
ATCCTCAAGC TGGCGCTGGT CAAGCGCAAG ATCGACGGCA AATGCCTGGA AGTCAAAGAC
GCCTACGCAT CCGGCAAGCT GATGAAGCAG GAAGCCGTAC TGCGCGAAGG CATCGACAAG
GAGCTGGCGA AGAAAATCGT CGCTCACGTC AAGGAAGCCA AACTCAAGGT CCAGGCCGCC
ATTCAGGGCG AGCAGGTACG CATTACCGGC AAGAAGCGCG ACGACCTGCA AGAGGCCATC
GCTGCACTGC GCGCCTACGA TTCGGGCATG CCGCTGCAGT TCAACAACTT CCGCGACTGA
 
Protein sequence
MPSFDVVSEL DKHEVTNAVD NAIKELDRRY DLKGKGTFEF KELTVTLTAE ADFQLEAMIE 
ILKLALVKRK IDGKCLEVKD AYASGKLMKQ EAVLREGIDK ELAKKIVAHV KEAKLKVQAA
IQGEQVRITG KKRDDLQEAI AALRAYDSGM PLQFNNFRD