| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4392 |
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| Symbol | |
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| ID | 1186073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4956360 |
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| End bp | 4957190 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395732 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | NP_794146 |
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| Protein GI | 28871527 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.49232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA ACGCAGAAGT CGGTCATCTG TGGCAAGCGT CGCAGGCGTG GATTCCGATG
ATCATGGAAT ACGGCAGCCG TTTGCTGCTG GCACTGGTCA CACTGTGCGT GGGCTGGTGG
CTGATCAATC GGCTCACCGG CAAACTGGGT GCGCTGCTGG CGCTGCGCCA CGCCGATCTG
GCCTTGCAGG GCTTTGTCAG CAACCTGGCG AACATCATTC TGAAAATCCT GCTGGTGGTC
AGCGTCGCAT CGATGATCGG CGTCGAAACC ACCTCGTTCG TGGCCGCTAT CGGTGCTGCC
GGTCTGGCCA TCGGTCTGGC CTTGCAAGGC AGCCTGGCGA ACTTCGCGGG CGGCGTGCTG
ATTCTGCTGT TTCGCCCGTT CCGCATTGGT GACTGGATCG AAGCTCAGGG TGTCGCGGGA
ACTGTCGACA ACATCCAGAT CTTCCACACC GTACTGCGCA CCGGCGACAA TCGCACCGTG
ATCATGCCCA ACGGCAACCT GTCCAACGGC ATCATCACCA ACACCAATCG TCAGCCGACC
CGCAAGATCT CGTTCGACAT CGGCGTCAGC CACGATGCGG ATCTGAGAAA AGCACTGCAG
GTCCTGCTGG ACATGGCCGA CGACCCGCGC GTACTCAAGG ACCCGGCCCC GCAGGCCGTG
GTCGCTGCGC TGGGCGAAAA CGCGATCACC CTGTCGCTGC GCGTCTGGAC CAGCACTGGC
GACATGGGCG ACGTGAGCTC AATGTTCAAC ATCGAAGCGC GTGACCGCTT GAAGGACGCA
GGCATCGAGA TTCCATTGCC GCAGCGGATT GTGCGGGTGG TTCAGGAGTA A
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| Protein sequence | MDLNAEVGHL WQASQAWIPM IMEYGSRLLL ALVTLCVGWW LINRLTGKLG ALLALRHADL
ALQGFVSNLA NIILKILLVV SVASMIGVET TSFVAAIGAA GLAIGLALQG SLANFAGGVL
ILLFRPFRIG DWIEAQGVAG TVDNIQIFHT VLRTGDNRTV IMPNGNLSNG IITNTNRQPT
RKISFDIGVS HDADLRKALQ VLLDMADDPR VLKDPAPQAV VAALGENAIT LSLRVWTSTG
DMGDVSSMFN IEARDRLKDA GIEIPLPQRI VRVVQE
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