| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4376 |
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| Symbol | groEL |
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| ID | 1186057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4938343 |
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| End bp | 4939986 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637395717 |
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| Product | chaperonin, 60 kDa |
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| Protein accession | NP_794131 |
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| Protein GI | 28871512 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTA AAGAAGTTAA GTTCGGCGAT GCTGGCCGTA AAAAAATGCT CGCCGGTGTA
AACGTCCTGG CTGACGCAGT AAAAGCGACC CTGGGCCCAA AAGGCCGTAA CGTTATCATC
GAAAAAAGCT TTGGCGCTCC GCTGATCACC AAAGACGGTG TGTCGGTTGC CAAGGAAATC
GAGCTTAAAG ACCGTTTCGA AAACATGGGC GCGCAGCTGG TCAAAGACGT TGCCTCCCGT
GCCAACGATG ATGCGGGTGA TGGTACTACT ACCGCTACCG TACTGGCTCA GGCCATCGTC
AACGAAGGCC TGAAAGCTGT CGCTGCCGGC ATGAACCCGA TGGACCTCAA GCGCGGCATC
GACAAGGCGA CCATCGCTAT CGTTGCAGAG CTGAAAAAGC TGTCCAAGCC TTGCACCGAC
ACCAAGGCAA TTGCCCAGGT CGGCACCATT TCGGCCAACT CTGATCACTC CATCGGCGAC
ATCATTGCCG AAGCCATGGA AAAAGTGACC AAAGACGGCG TTATCACCGT TGAAGAAGGT
TCGGGCCTGG AAAACGAGCT GTCTGTTGTA GAAGGCATGC AGTTTGACCG CGGTTACCTG
TCCCCGTACT TCATCAACAA GCCGGACACC ATGGTCGCCG AGCTCGACAG CCCGCTGCTG
TTGCTGGTCG ACAAGAAGAT CTCCAACATT CGCGAAATGC TGCCGGTTCT GGAAGCAGTC
GCCAAGGCTG GCCGTCCTCT GCTGATCGTT GCTGAAGACG TTGAAGGCGA AGCGCTGGCA
ACTCTGGTTG TCAACAACAT GCGCGGTATC GTGAAAGTTG CAGCCGTCAA GGCTCCAGGT
TTCGGCGACC GTCGCAAGGC CATGCTGCAG GACATCGCTG TTCTGACTGG CGGTACCGTC
ATCTCCGAAG AGATCGGTCT GAGCCTGGAA ACCACTACCC TGGAACACCT GGGTAATGCC
AAGCGCGTCA TCCTGAACAA AGAAAACACC ACCATCATTG ATGGTGCTGG CGTCAAAACC
GATATCGACT CGCGTATCTC CCAGATCCGT CAGCAAATCG GCGACACCAG CTCGGACTAC
GACAAGGAAA AACTGCAGGA GCGTCTGGCC AAGCTGTCTG GCGGCGTTGC AGTGATCAAG
GTCGGTGCCG GTTCCGAAGT TGAAATGAAA GAGAAGAAAG CCCGCGTTGA AGACGCCCTG
CACGCAACCC GTGCAGCGGT CGAAGAAGGC GTGGTACCTG GCGGTGGCGT AGCACTGGTT
CGCTCGCTGC AGGCCATCGA AGGTCTGAAA GGCGACAACG CCGATCAGGA CGTCGGTATT
GCTCTGCTGC GTCGCGCAGT CGAAGCGCCT CTGCGCCAGA TCGTTGCCAA CTCCGGTGAC
GAGCCAAGCG TTGTGGTCGA CAAGGTCAAG CAGGGTTCGG GTAACTTCGG TTACAACGCT
GCTTCCGGCG AATACGGCGA CATGATTGAA ATGGGTATCC TCGACCCGGC CAAAGTGACT
CGCTCTGCTC TGCAGGCCGC GTCCTCCATC GCCAGCCTGA TGATCACCAC CGAAGCGATG
ATCGCTGACG TGGCTGATGA AAAGGCAGCA GGCGGCGGCA TGCCGGACAT GGGCGGCATG
GGTGGTATGG GCGGCATGAT GTAA
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| Protein sequence | MAAKEVKFGD AGRKKMLAGV NVLADAVKAT LGPKGRNVII EKSFGAPLIT KDGVSVAKEI
ELKDRFENMG AQLVKDVASR ANDDAGDGTT TATVLAQAIV NEGLKAVAAG MNPMDLKRGI
DKATIAIVAE LKKLSKPCTD TKAIAQVGTI SANSDHSIGD IIAEAMEKVT KDGVITVEEG
SGLENELSVV EGMQFDRGYL SPYFINKPDT MVAELDSPLL LLVDKKISNI REMLPVLEAV
AKAGRPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DIAVLTGGTV
ISEEIGLSLE TTTLEHLGNA KRVILNKENT TIIDGAGVKT DIDSRISQIR QQIGDTSSDY
DKEKLQERLA KLSGGVAVIK VGAGSEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALV
RSLQAIEGLK GDNADQDVGI ALLRRAVEAP LRQIVANSGD EPSVVVDKVK QGSGNFGYNA
ASGEYGDMIE MGILDPAKVT RSALQAASSI ASLMITTEAM IADVADEKAA GGGMPDMGGM
GGMGGMM
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