Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4375 |
Symbol | |
ID | 1186056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4937515 |
End bp | 4938258 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395716 |
Product | PAP2 superfamily protein |
Protein accession | NP_794130 |
Protein GI | 28871511 |
COG category | [R] General function prediction only |
COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAA CCGTCGCGCC ACCCTACTCT CGCCCGATAA ATCCATGGAT TTACCTGGGT ATCCCCGCCG TCGTCGCATT GATCCTTGTA CTGCTTGAAC TGACCTCGCT GGACATGGAT ATCGCCAAGC TGGCCTTCGA CCCCGTCAGC GGGCAATTCA TTGGCAGGCA CAGCTATTTT CTGGAAGACA TCCTCCACGA CCGCGCCAAA CAATTGGTCA TGCTGTTCGG CGTACTGGCG ATGATCGGCT TTGCGGCATC CTTCAAGGTA CAGCGGCTGA TGCCGTGGCG CAGAGAACTG GGTTGCCTGG TGCTGTCCAT GGCGCTTTCA ACCGCCTTCG TAACTCCGGT GAAAGTGGTG ACTTCAGTGC AATGCCCCTG GAGCCTGACA GAGTTCGGCG GCCAGGAAAC CTACAGCGAA CTGTTGAGCC CACGCCCCGC CACCGACAAG CCAGGGCGCT GCTGGCCAGG TGGTCATGCG GCCACCGGCT TTACCCTGTT TGCGCTGTTC TTCATGCTGC GTGATCGTCG GCCACGTCTG GCTAAATTGG GACTGGCACT GGCGTTAGGT CTGGGATCGA TCTTTTCTGC CGGCCGGATG CTGCAAGGCG CACACTTCTT TTCCCATAAC ATCTGGACGG CGGTGTTTTG CTGGTTGATC TGTCTGGGGG TTTATTACTT TGTGCTGTAC CGGCCGGAAC CCAAGCATAG TGCGAACACA GCGGCTCCCC CCTCTACGCA CTAA
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Protein sequence | MSKTVAPPYS RPINPWIYLG IPAVVALILV LLELTSLDMD IAKLAFDPVS GQFIGRHSYF LEDILHDRAK QLVMLFGVLA MIGFAASFKV QRLMPWRREL GCLVLSMALS TAFVTPVKVV TSVQCPWSLT EFGGQETYSE LLSPRPATDK PGRCWPGGHA ATGFTLFALF FMLRDRRPRL AKLGLALALG LGSIFSAGRM LQGAHFFSHN IWTAVFCWLI CLGVYYFVLY RPEPKHSANT AAPPSTH
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