| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4343 |
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| Symbol | |
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| ID | 1186024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4902312 |
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| End bp | 4906652 |
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| Gene Length | 4341 bp |
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| Protein Length | 1446 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395684 |
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| Product | insecticidal toxin protein, putative |
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| Protein accession | NP_794098 |
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| Protein GI | 28871479 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCTC AATCGCAATC GCAGAATCAA TCGCCGCAAT CTCTCCAGCC GGCTGTTGCC
ACCCCGTTAT TACCCAAAGG CGGTGGCGCG ATTCAAAGCA TCGGCAAGGG CTGGGGATCC
GTTGGTACCA GCGGCGCGGC GTCACTGGAA GTCGCTCTGC CGATCAGCCC GGGACGCGGT
TACGCGCCCG CCCTGTCGCT GAGTTATCAG AGCACTTCCG GCAACGGAGT GTTCGGACTT
GGCTGGAACC TGAACACCAG CAAAGTCGCG CGTCGTGCCA GCAAGGGCGT ACCGACCTAT
GCCAACGATG ACCTCATTTT CGGCCCCGGA GGCGATGTCT GCCTGCCAGA ACGTGACGAC
AGCGGCGCGC TGGTTTCGAC TCAGGTCAGT CGCTACAACG ACCATGATTT GAATGCGACT
TATCAGGTGG TGCGTTACTT CAGCCGAGTC GAAGGGGCCT TTTTGCGCAT CGAGCATTGG
CGCGTAGACA TTGCAGATCC CGGCTTCTGG CTGATTCACG GTGCCGACGG CAGCCTGAAC
CTTTATGGCA GGAGGACCTC GTCGCGCATT GCCGACCCGG CAGACATGAA TCGGGTTGCC
GAATGGTTGC TGGATGAAAG CATGAATGCC ATCGGCGAAC ACATCCTCTA TGAATACAAG
CCCGAAGACC ATCAGGGCCT GGCGGAGGAT CACCCGAGAA ACTTCCGCGC CCAACGCTAC
CTGAGCCGGG TTCGCTACGG CAATGCCAAG GCGCACTACG TACTTTACCT GTGGCAGGAA
GATTCGCTGG ACGGTTTGCT GTGGCATTTC GACCTGATAT TCGACTATGA CCAGCGCGAC
ACCCGCAGTG AGCCGCCCCC GGAATACGAC GAGCAATTTA CCTGGCCGGT GCGCAGTGAT
CCGCATTCAA GTTTCGCCTA TGGTTTTGAG CTGGGTAATC TGCGCCTGTG CCGGCAGGTT
TTGATGTTCC ATCACTTCCC GAATGAACTC GGAGAAGCCC CGCTGCTGAC CCGGCGACTG
CTGCTGGAGC ACCTTCAGAC AACGCTCGGC TACAACCTGC TGAGCGCGGC GCATTCGCAG
GCATGGGATG GCACGGACTG GCGGCGCGTC GATCAGCAAC CTCCTGTGCA ATTTCAATAC
ACCGATTTCA GTCTTGAGTC GGGCATCTAC ACGCCACTGG AGCCCATGGC CGGCCTGAAT
GACGGCCAGC AATACCAGTT GGTCGATCTG TATGGCGACG GCTTGCCCGG CATTCTGTAC
CGAGACGACA AGGCCTGGCT CTATCGCGAA CCGGTCCGTG ATACCACTGG CGGAGCGGAC
GCCGTTGCCT ACGGAGCCTG TCAACCGCTA CCCCGCATCC CCACGGCTGA TTCAGCCACA
CCGGTACGTC AGACCCTCAC AGATCTGACC GGCGACGGGC GGCTGGACTG GGTTGTAGCC
CAGCCGGGAA TGGCCGGATT CTTTACCCTC AACCCTGATC GAAGCTGGTC GAACTACGCC
ACATTCTCGG CTTTTCCTGC AGAGTTTTTC CACCCGCAAG GCCAGATGGC GGATCTGGTC
GGCGACGGGT TGTCGGATCT GGCCTTGATC GGGCCGCGCA GCGTTCGCCT GTACGCCAAC
CGTCGAGCCG ATGGATTCGC CGCAGCAACG GACATTCCTC ACGACGAGGA TCGCCTGCCA
TTGCTCAGCG ACAGTTCCAC TGAACTGGTG GCGTTCAGCG ACCTGCTGGG CACAGGGCAA
CAACACCTGA TCCGTATCCG GCACAACGAA ATCCGCGTCT GGCCAAACCT GGGCCGAGGC
CGGTTCGGCA AGGGCCAGTT GTTTGCCACC CTGCCCTACA CCTATGAAGC CTTTGATTCG
AGCCAGGTGC GGCTGGCCGA CCTGGACGGT TCAGGTGCCA GTGACGTGCT GTACCTGCAA
GCCGATGGCT TTCAGGTCTT CATGAACCGG GGCGGCAACG GGCTGGCCGC GCCCTTCGAT
CAGCGCTGGC CGGAGGGCGT GCGTTATGAC CGGTTCTGTC AGTTCAGTGC GGTCGATCTG
CTGGGCCTCG GTTTCTCCAG CCTGGTACTG ACCGTACCGC ACATGGCGCC ACTGCACTGG
AGCCTTTACT ACGCGGCGGA CCGGGCAGGC TCGGTGCGCA AACCTTATTT GCTGAAGGCC
TCGGACAACA ATCTCGGTGC TGCCGGAGAA GTCAGCTATC GCAGTTCGGC GCAGGAATGG
CTGGACGAAA AAAACGAGCT GCGGGCCGCA GGCAGCGTTG CTGTCTCGGA ATTACCGTTC
CCGGTTCATG TGGTCGTCAG GCAAACCATG CAGGACAAGG TCACTGGCAA TACGCTGACT
CAGTTGTTCC GCTATCGGCA GGGTTTCTAT GACCCTCGCG AACGCGAGTT TCGCGGCTTC
GGCCTGCTCC TGCAGACCGA CACCGAAACG TCGTCGCAGG ATCAGGAAGA CTTTACCGCT
CCGGTATTGA ACAAGACCTG GTTCCACACC GGACGCTATC CTGCCAGACC CTGCACCGAC
CATGACCGCA GCGATCTCCT GGCACGCTTG CCCGGCGAGC ATGTGTTGTC CCGACTCGAC
GCCGCAACCC AGACAGAGCA GCCAATAACG GATGCGGATG ACGCGACCTT GCAGGAAATG
GCGCGAGCGC TGAGCGGCTC GGTACTGCGC AGCGAAGTCT TTGGGCTCGA CGCCAGTCAA
CGTCCCACAG TGCTGTATTC GACCCGGTCA TGCCGCTATC TGGTTCGCCA ACTGCAAGCA
TTGAGCGCAC ATCGACCCTA CGCGTCGATG CTGCCGCTGA GCCTGGAAGT CATCACCTAT
CGTTACGAGG CCGAGGAACT GGAGGACCCG ATGTGCGAAC ACAGCCTGAA CCTGGCGTGG
GACCGCTACG GCTCGACGCT CCACTCAGTC AGCGTCAACT ATGCCCGGCG CAAGAAACCG
GGTGACGCGC CACCCTTTGC GGACCCTCAC CAGCAACAAT GGTGGGAGGC GTCACACGAC
GACGCCCAGC AACAGTTCTA CCTGAATGAA ATGCACGCCG AAGCAATTTA CCTGGACAGC
CCGCAGAGCT GGCGTCTGGG GCTGCCTTAC CGCACACGCG GCGACGCCAT GCTCATTCCG
GCAAGCGCCT TGACGCCTGC GCAGATCAGC TACGAACAGT TCGCCGATCC GTCCGGGCCC
TTCGCAACCT TGCCACGTAC GCTCACCAGT CTGTCGGTGC AACGCTACAT CGGTTGCGGC
GATGGCGAGG CGTCCTTTCA GGCGCTGGCT GACGCCGTTG AAACGGCTGA ACTGGATGAT
CATGCACTGA GCGCCTATGA GCGGGTCATG GACAGCGTCA CTCTGGCCGA AAAACTCGTC
GAGATCGGTT ATCAGCAGAT GCCAAGCTTT CTGCCAGCAG ACAGCCTGAA TCTATGGTCG
GTAAAACGCG GCTTCGCCAC CTACGCCGGT CAGGAGCACT TCTTTCATCC CACTCAGTTC
AGGCCCACGC GCAGTCACGG CTGGAGTCTC GTCGAATACG ACGCCTACCA CCTGTTCGCA
ACTCGCATCA CCGACCCGGC AGACTGCGTC ACTACCGCTG AATACGATTA TCGTGTGCTG
CAACCAAAAC GAATCATCGA CCCCAATCAG AACCGTCAGG AAGCTGATTA CGACGCCTTC
GGCAGAGTAT GGGCAACCAG CTTTTACGGC ACGGAACTGG GTGAGGCAGT CGGTTTTCCT
CCACTCAATC GCGCCGGGCA TTATTGGGCT TCTGCCGGCG AGGTAGCGCT GCAACCCGAA
TACGCTCTGG GCAGGCAAGC CAGCGCGCTC TATTACGACG GCAACACGGT TCTGGGGCTG
GTCCACATCC CGCTGGCAAC CGCTGTCCTG GTTGCAGACC GCTACCCGGA AGACCTGGAC
AAGCAGATCC GCATCAGCAT GGCGTCGATA GACGGCTTCG GTCGCACGCT GCAAACCCGT
CAAAAGGTGG AGGACGGCGA CGCCTATTCA GTCGATGAAT GGGGCAATCT GGAACTGGTC
GACGGTAAGC CGAAAATTGT CCACGCATCA CCGCGCTGGC GTATCAGTGA ACGTGTGGAA
TACAACAATA AAGGCCTGGC GGTGCGCGTT TATCGGCCGT ATTTCGCCAA CAGTCATCTG
TATGTGAACG ACGCATCGAT ACGCTCACAA AACATTGTCG ACAAACAGTT CTACGACCCG
CTGGGGCGTC CGACCATCAC AATCACCGCC AAAGGCTGGA TGCGCCGACA GACCTATCGA
GTCTGGTACA CCATCAGTGA GGACGAAAAC GACACGGCCG AGGAAGTGCT GGCAGCGAGA
AAGGCAGCCG AGCATGGTTA A
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| Protein sequence | MEAQSQSQNQ SPQSLQPAVA TPLLPKGGGA IQSIGKGWGS VGTSGAASLE VALPISPGRG
YAPALSLSYQ STSGNGVFGL GWNLNTSKVA RRASKGVPTY ANDDLIFGPG GDVCLPERDD
SGALVSTQVS RYNDHDLNAT YQVVRYFSRV EGAFLRIEHW RVDIADPGFW LIHGADGSLN
LYGRRTSSRI ADPADMNRVA EWLLDESMNA IGEHILYEYK PEDHQGLAED HPRNFRAQRY
LSRVRYGNAK AHYVLYLWQE DSLDGLLWHF DLIFDYDQRD TRSEPPPEYD EQFTWPVRSD
PHSSFAYGFE LGNLRLCRQV LMFHHFPNEL GEAPLLTRRL LLEHLQTTLG YNLLSAAHSQ
AWDGTDWRRV DQQPPVQFQY TDFSLESGIY TPLEPMAGLN DGQQYQLVDL YGDGLPGILY
RDDKAWLYRE PVRDTTGGAD AVAYGACQPL PRIPTADSAT PVRQTLTDLT GDGRLDWVVA
QPGMAGFFTL NPDRSWSNYA TFSAFPAEFF HPQGQMADLV GDGLSDLALI GPRSVRLYAN
RRADGFAAAT DIPHDEDRLP LLSDSSTELV AFSDLLGTGQ QHLIRIRHNE IRVWPNLGRG
RFGKGQLFAT LPYTYEAFDS SQVRLADLDG SGASDVLYLQ ADGFQVFMNR GGNGLAAPFD
QRWPEGVRYD RFCQFSAVDL LGLGFSSLVL TVPHMAPLHW SLYYAADRAG SVRKPYLLKA
SDNNLGAAGE VSYRSSAQEW LDEKNELRAA GSVAVSELPF PVHVVVRQTM QDKVTGNTLT
QLFRYRQGFY DPREREFRGF GLLLQTDTET SSQDQEDFTA PVLNKTWFHT GRYPARPCTD
HDRSDLLARL PGEHVLSRLD AATQTEQPIT DADDATLQEM ARALSGSVLR SEVFGLDASQ
RPTVLYSTRS CRYLVRQLQA LSAHRPYASM LPLSLEVITY RYEAEELEDP MCEHSLNLAW
DRYGSTLHSV SVNYARRKKP GDAPPFADPH QQQWWEASHD DAQQQFYLNE MHAEAIYLDS
PQSWRLGLPY RTRGDAMLIP ASALTPAQIS YEQFADPSGP FATLPRTLTS LSVQRYIGCG
DGEASFQALA DAVETAELDD HALSAYERVM DSVTLAEKLV EIGYQQMPSF LPADSLNLWS
VKRGFATYAG QEHFFHPTQF RPTRSHGWSL VEYDAYHLFA TRITDPADCV TTAEYDYRVL
QPKRIIDPNQ NRQEADYDAF GRVWATSFYG TELGEAVGFP PLNRAGHYWA SAGEVALQPE
YALGRQASAL YYDGNTVLGL VHIPLATAVL VADRYPEDLD KQIRISMASI DGFGRTLQTR
QKVEDGDAYS VDEWGNLELV DGKPKIVHAS PRWRISERVE YNNKGLAVRV YRPYFANSHL
YVNDASIRSQ NIVDKQFYDP LGRPTITITA KGWMRRQTYR VWYTISEDEN DTAEEVLAAR
KAAEHG
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