Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4329 |
Symbol | |
ID | 1186010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4880361 |
End bp | 4880729 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395671 |
Product | ISPs1, transposase OrfA |
Protein accession | NP_794085 |
Protein GI | 28871466 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGC GTTACGAACT CTCCGACGCA TCGTGGGAAT TGATTAAAGA CCTGGTTTTT CCCGAGCAGA AAATGGGTCG CCCACGCAGT GATGATCGCC TGGTACTGCA TGGAATCCTT TGGATCCTGT GCTCGGGCGC TGCGTGGCGC GATCTTCCTG AGCGCTTTGG GCCTTGGTCA ACGGTGTATC AGCGTTTTCG TGACTGGCGC GACGACGGCA CGTTCGACCG AATACTGGAG CGCTTGCATA TTCGACTGAA CCGGGAAGGA CTGATCGATC TGGACACCTG GATGATCGAT TCCACGGCGG TACGTGCAAC CCGAGCCTCT TCAGGCGCCG GGAAAAAGGG GGGTCTGAAG AACCGCTAG
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Protein sequence | MAKRYELSDA SWELIKDLVF PEQKMGRPRS DDRLVLHGIL WILCSGAAWR DLPERFGPWS TVYQRFRDWR DDGTFDRILE RLHIRLNREG LIDLDTWMID STAVRATRAS SGAGKKGGLK NR
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