Gene PSPTO_4328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4328 
Symbol 
ID1186009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4879876 
End bp4880313 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID637395670 
ProductISPs1, transposase OrfB 
Protein accessionNP_794084 
Protein GI28871465 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTGCG ACGCCAATGG TGTTCCCTTA CGTTTCATCC TTTCGGCGGG GCAAGCCAGC 
GATATCGCTC ACGCCCAGCC GCTGCTGGAT CAGGTGCGAA TTTCCGGTAA GCCGGGGCGA
CCACGCAAGC GTAGTCGCTG GTTACTGGCT GACAAAGGCT ATGACGCAGA ACACCTGCGA
CAGTACTGCG ACCGTTACCG AATGCAGCCG GTGATTCCGC TGCGCGCCAT GCCACGCAAA
CCCCGGCCAG GCTTGCCCCG GCTCTTTGAT CTTCCAAAGT ACCGGCAGCG GAACATCATT
GAGCGGATGT TTGGCTGGCT AAAGGAGAAC CGCAGAATAG GCACTCGCTA CGACAAGCTG
GCCAGGAGCT TTGCAGCCAT GGTCACGCTG GCCTGCAGCC TACGTTGTAT GCGGCAATAC
TTTTCGTACA AAACCTAG
 
Protein sequence
MVCDANGVPL RFILSAGQAS DIAHAQPLLD QVRISGKPGR PRKRSRWLLA DKGYDAEHLR 
QYCDRYRMQP VIPLRAMPRK PRPGLPRLFD LPKYRQRNII ERMFGWLKEN RRIGTRYDKL
ARSFAAMVTL ACSLRCMRQY FSYKT