Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4328 |
Symbol | |
ID | 1186009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4879876 |
End bp | 4880313 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395670 |
Product | ISPs1, transposase OrfB |
Protein accession | NP_794084 |
Protein GI | 28871465 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTGCG ACGCCAATGG TGTTCCCTTA CGTTTCATCC TTTCGGCGGG GCAAGCCAGC GATATCGCTC ACGCCCAGCC GCTGCTGGAT CAGGTGCGAA TTTCCGGTAA GCCGGGGCGA CCACGCAAGC GTAGTCGCTG GTTACTGGCT GACAAAGGCT ATGACGCAGA ACACCTGCGA CAGTACTGCG ACCGTTACCG AATGCAGCCG GTGATTCCGC TGCGCGCCAT GCCACGCAAA CCCCGGCCAG GCTTGCCCCG GCTCTTTGAT CTTCCAAAGT ACCGGCAGCG GAACATCATT GAGCGGATGT TTGGCTGGCT AAAGGAGAAC CGCAGAATAG GCACTCGCTA CGACAAGCTG GCCAGGAGCT TTGCAGCCAT GGTCACGCTG GCCTGCAGCC TACGTTGTAT GCGGCAATAC TTTTCGTACA AAACCTAG
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Protein sequence | MVCDANGVPL RFILSAGQAS DIAHAQPLLD QVRISGKPGR PRKRSRWLLA DKGYDAEHLR QYCDRYRMQP VIPLRAMPRK PRPGLPRLFD LPKYRQRNII ERMFGWLKEN RRIGTRYDKL ARSFAAMVTL ACSLRCMRQY FSYKT
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