Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4326 |
Symbol | |
ID | 1186007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4878641 |
End bp | 4879582 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637395668 |
Product | hypothetical protein |
Protein accession | NP_794082 |
Protein GI | 28871463 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCACG CGCTGACAGC AGCTGGTCAG CAGGTTACTG AGCGTGTCCG TTACGCCGAG CGCGAGAACC CGAACATCGA GCATTTTTTG TCACAGTGCG ATGCCTATCT AGCGTTCAAT GACGATCCAG AGGTTGAAGA GTTTGTTGCA CGCGTTAAAG AGCAGATCCT GCATGCTTGC TCAACGTTCA TCACCCTGCC CACTTCGGAC ATATCTGCCT ACCGTGAGCT CCTTCAGAAG TTAGCCAGAA GGCGAGTGCG TGACCCGCGA CTGAAAGTAT TTACGACAAA CTACGACATG TGCTTTGAAA CGGCAGCGTC GGAACTCGGC ATGGTCATTA TTGACGGTTT CTCCTACACC CGCAGACGCC GGTTTGACGG CAAACATTTC ACGTACGACA TCGTACGCCG GGAGGCAGAC AGCCACGAGT TTGCTGAAGG CATTTTTCAA CTGCTGAAGC TGCACGGATC AGTCAGCTGG AGCCGAGAGG GTCATGAAGT CTATGAGGAC AGCCGACCGA CGCCGGAAAA TGCGTGCCTG ATATATCCCG CAAAAGGAAA ATACCAGCAA GCATTTCTTC AACCCCACTT GGAGCTGCTT TCAAGATTTC TGGAGTTTTT GCGTCAACCA AATAGCTGCC TAGTTGTGTC AGGATTCGGG TTTAACGATG ACCATCTTTC CGAACCGATC TACTCAGCTT TGCAATCCAA CCCAAGCCTG AAGCTGATTC TTTGCGACTA CAACGGCATC AGCCATGTCC ACAACCGTGG GGATAATGGA TCGAGCCCCT ACTGGGGAAA ATTCCGCGAT CTTGCTCAGC GCGGTTTGGA CGTCCATTTT GTTAGCGGCT CATTTGGCGA TTTGGCGGCT CATATCCCTC ACCTGCGCAC GGCTTCGCCA GCTGAACAGT TGGCAAATGC TGTTAAACGG ATCGGTAGGT AA
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Protein sequence | MTHALTAAGQ QVTERVRYAE RENPNIEHFL SQCDAYLAFN DDPEVEEFVA RVKEQILHAC STFITLPTSD ISAYRELLQK LARRRVRDPR LKVFTTNYDM CFETAASELG MVIIDGFSYT RRRRFDGKHF TYDIVRREAD SHEFAEGIFQ LLKLHGSVSW SREGHEVYED SRPTPENACL IYPAKGKYQQ AFLQPHLELL SRFLEFLRQP NSCLVVSGFG FNDDHLSEPI YSALQSNPSL KLILCDYNGI SHVHNRGDNG SSPYWGKFRD LAQRGLDVHF VSGSFGDLAA HIPHLRTASP AEQLANAVKR IGR
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