Gene PSPTO_4326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4326 
Symbol 
ID1186007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4878641 
End bp4879582 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content52% 
IMG OID637395668 
Producthypothetical protein 
Protein accessionNP_794082 
Protein GI28871463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCACG CGCTGACAGC AGCTGGTCAG CAGGTTACTG AGCGTGTCCG TTACGCCGAG 
CGCGAGAACC CGAACATCGA GCATTTTTTG TCACAGTGCG ATGCCTATCT AGCGTTCAAT
GACGATCCAG AGGTTGAAGA GTTTGTTGCA CGCGTTAAAG AGCAGATCCT GCATGCTTGC
TCAACGTTCA TCACCCTGCC CACTTCGGAC ATATCTGCCT ACCGTGAGCT CCTTCAGAAG
TTAGCCAGAA GGCGAGTGCG TGACCCGCGA CTGAAAGTAT TTACGACAAA CTACGACATG
TGCTTTGAAA CGGCAGCGTC GGAACTCGGC ATGGTCATTA TTGACGGTTT CTCCTACACC
CGCAGACGCC GGTTTGACGG CAAACATTTC ACGTACGACA TCGTACGCCG GGAGGCAGAC
AGCCACGAGT TTGCTGAAGG CATTTTTCAA CTGCTGAAGC TGCACGGATC AGTCAGCTGG
AGCCGAGAGG GTCATGAAGT CTATGAGGAC AGCCGACCGA CGCCGGAAAA TGCGTGCCTG
ATATATCCCG CAAAAGGAAA ATACCAGCAA GCATTTCTTC AACCCCACTT GGAGCTGCTT
TCAAGATTTC TGGAGTTTTT GCGTCAACCA AATAGCTGCC TAGTTGTGTC AGGATTCGGG
TTTAACGATG ACCATCTTTC CGAACCGATC TACTCAGCTT TGCAATCCAA CCCAAGCCTG
AAGCTGATTC TTTGCGACTA CAACGGCATC AGCCATGTCC ACAACCGTGG GGATAATGGA
TCGAGCCCCT ACTGGGGAAA ATTCCGCGAT CTTGCTCAGC GCGGTTTGGA CGTCCATTTT
GTTAGCGGCT CATTTGGCGA TTTGGCGGCT CATATCCCTC ACCTGCGCAC GGCTTCGCCA
GCTGAACAGT TGGCAAATGC TGTTAAACGG ATCGGTAGGT AA
 
Protein sequence
MTHALTAAGQ QVTERVRYAE RENPNIEHFL SQCDAYLAFN DDPEVEEFVA RVKEQILHAC 
STFITLPTSD ISAYRELLQK LARRRVRDPR LKVFTTNYDM CFETAASELG MVIIDGFSYT
RRRRFDGKHF TYDIVRREAD SHEFAEGIFQ LLKLHGSVSW SREGHEVYED SRPTPENACL
IYPAKGKYQQ AFLQPHLELL SRFLEFLRQP NSCLVVSGFG FNDDHLSEPI YSALQSNPSL
KLILCDYNGI SHVHNRGDNG SSPYWGKFRD LAQRGLDVHF VSGSFGDLAA HIPHLRTASP
AEQLANAVKR IGR