| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4315 |
|---|
| Symbol | |
|---|
| ID | 1185996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4865912 |
|---|
| End bp | 4866292 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637395657 |
|---|
| Product | transcriptional regulator, putative |
|---|
| Protein accession | NP_794071 |
|---|
| Protein GI | 28871452 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000286205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGA TCAACGAATA CCGCGCCACC GAAGAAGCCA TCAAAGAACT GCAAGCCCGT
TTGAAAAATC TGTCGCAAGA CGACAAACTG CAAACCGAGC TGGAATTCGA AGGCAAACTG
CGCACGCTGA TGGGTGAATA TCAAAAATCG CTGCGTGACA TCATTGCTTT GCTGGATCCG
GACGCCAAGG TAAACAAGGC CCCACGTGGC GGCGCTGTTA AACCTGCCGG CACCAAGCGC
GCTCGCAAGG TCAAGCAATA CAAGAACCCG CACAACGGCG AAGTCATCGA AACCAAAGGT
GGCAACCACA AGACTCTGAA AGAGTGGAAA GCAAAGTGGG GCAGTGACGA CGTTGAAAGC
TGGGCCACTC TGCTGGGCTA A
|
|---|
| Protein sequence | MSLINEYRAT EEAIKELQAR LKNLSQDDKL QTELEFEGKL RTLMGEYQKS LRDIIALLDP
DAKVNKAPRG GAVKPAGTKR ARKVKQYKNP HNGEVIETKG GNHKTLKEWK AKWGSDDVES
WATLLG
|
|---|
| |