| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4307 |
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| Symbol | catF |
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| ID | 1185988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4857791 |
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| End bp | 4858990 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637395649 |
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| Product | 3-oxoadipyl-CoA thiolase |
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| Protein accession | NP_794063 |
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| Protein GI | 28871444 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGATG TCTTTATTTG CGACGCGATT CGCACCCCTA TCGGCCGTTT CGGCGGCGGG
TTGTCGTCGG TGCGTGCTGA CGATCTGGCC GCCGTGCCGA TCAAGGCGCT GATGGAGCGC
AATCCTTCGG TGAACTGGGA AGAGATCGAC GAGGTGTTCT TCGGCTGCGC CAACCAGGCC
GGTGAAGACA ACCGCAATGT GGCGCGCATG GCGGCCTTGC TGGCGGGCCT GCCGACCAGC
GTGCCGGGCG TTACCCTCAA CCGTTTGTGC GCGTCGGGCA TGGACGCCAT CGGCACGGCG
TTCCGGGCCA TCGCCTCGGG CGAAATGGAG CTGGCGATTG CTGGCGGCGT CGAGTCGATG
TCCCGTGCGC CGTTCGTCAT GGGCAAGGCC GATGCAGCGT TTTCGCGCAA CATGAAGCTG
GAAGACACCA CCATCGGCTG GCGTTTCATC AACCCGGCCA TGAAAGCGCT GTACGGCGTG
GACTCCATGC CTGAGACCGG CGACAACGTT GCCACTGACT TCAGGATTTC TCGAGCCGAT
CAGGACGCTT TCGCCCTGCG CAGCCAGCAA CGCACCGCCA TTGCCCAGGC TGCGGGCTTT
TTCGAGGAAG AGATTGTGCC GGTGCGGGTT GCACACAAAA AAGGCGAAAC TATTGTCGAC
AAGGATGAGC ATCCGCGTGG CGACACCAGC CTGGAAACCC TGAGCAAACT CAAGCCGGTC
AACGGCCCGG ACCAGACCGT CACGGCGGGC AACGCATCCG GGGTCAACGA CGGAGCGGCT
GCACTGATTC TGGCGTCGGC CGAGGCCGTC AAAAAGCACG GCCTGACGCC TCGCGCGCGG
GTGCTCGGCA TGGCCAGCGC GGCGGTCGAG CCTCGGGTGA TGGGCATTGG CCCGGTGCCC
GCGGTGCGCA AGCTGGTCGA GCGGTTGGGC CTGGCGGTCG CCGATTTCGA CGTTGTCGAG
CTCAACGAGG CCTTCGCCAG CCAGGGCCTG GCGGTCTTAC GTGAGCTGGG CCTGGCGGAC
GACGCCCCGC AGGTCAACCC CAATGGCGGT GCGATTGCAC TGGGGCATCC GCTGGGCATG
AGCGGTGCAC GACTGGTGCT CACGGCCTTG CACCACCTGG AAAAAACCGG CGGGCGCAGA
GGCCTGGCGA CCATGTGCGT GGGTGTCGGT CAGGGCCTGG CGCTAGCCAT AGAGCGTTAA
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| Protein sequence | MRDVFICDAI RTPIGRFGGG LSSVRADDLA AVPIKALMER NPSVNWEEID EVFFGCANQA
GEDNRNVARM AALLAGLPTS VPGVTLNRLC ASGMDAIGTA FRAIASGEME LAIAGGVESM
SRAPFVMGKA DAAFSRNMKL EDTTIGWRFI NPAMKALYGV DSMPETGDNV ATDFRISRAD
QDAFALRSQQ RTAIAQAAGF FEEEIVPVRV AHKKGETIVD KDEHPRGDTS LETLSKLKPV
NGPDQTVTAG NASGVNDGAA ALILASAEAV KKHGLTPRAR VLGMASAAVE PRVMGIGPVP
AVRKLVERLG LAVADFDVVE LNEAFASQGL AVLRELGLAD DAPQVNPNGG AIALGHPLGM
SGARLVLTAL HHLEKTGGRR GLATMCVGVG QGLALAIER
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