| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4300 |
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| Symbol | |
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| ID | 1185981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4846462 |
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| End bp | 4847976 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395642 |
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| Product | drug resistance transporter, EmrB/QacA family |
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| Protein accession | NP_794056 |
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| Protein GI | 28871437 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCATCAG GTTTTGCCTT GACCAGTCTT ACTCAAACGC CTCCGGCCAT TCGCAGCATT
CTGTTCGCGC TGATGATGGC GGTACTGCTC AGCGCGCTGG ATCAGACCAT CGTTGCCGTC
TCGATGCCGG CCATTTCCGC TCAGTTCAAG GATATCGACC TGCTGGCCTG GGTCATTTCC
GCCTATATGG TTTCGCTGAC CGTGGCCGTG CCGATCTACG GCAAGCTGGG CGATCTCTAC
GGGCGGCGCA AACTGATGCT GTTCGGGCTG GGGCTGTTCA CCCTCGCCTC GCTGTTCTGC
GGCATGGCGC AAAGCATGGA GCAACTGGTG CTGGCACGCG TGCTTCAAGG CATCGGTGCG
GGCGGCATGG TGTCGGTGAG CCAGGCGATC ATTGCCGATA TCGTTCCGCC TCGTGAACGG
GGCCGTTATC AGGGCTATTT CAGCAGCATG TACGCGGTCG CCAGCGTAGC AGGCCCGGTG
CTGGGCGGCC TGATGACTGA ATACCTGTCC TGGCGCTGGG TGTTTTTGAT CAATCTGCCA
CTGGGAGCTG CCGCCCTGAT CGTCGCTTAC AGGACCCTCG TCGGCCTGCC GGTTCCACAG
CGCAAGCCGA TTATCGATTA CCTGGGGACG GTGCTGATGA TCATCGGCCT GACCGCCCTG
TTGCTGGGGA TCACCCAGAT AGGCCAGGGA CACGACCTGG GCAACCGCGA CGTTCAACTG
TTACTGGGCA CCGCCCTGGT GGCGCTGGCT GTTTTCGTCT GGTACGAACG CCGCGCGCCT
GAACCATTGT TGCCCATGCA TCTGTTTGCC AATAAAAGCG CCGTGCTTTG CTGGTGCACC
GTGTTCTTCA CCAGTTTTCA GGCTATCTCG CTGATTGTGC TGATGCCGCT GCGTTACCAG
ACCGTCACCG GTGGCGGTGC GGACAGCGCC GCGCTGCACC TGCTTCCGCT GGCTATCGGC
ATGCCGATGG GCGCTTATTT TTCCGGGCGA CGCACCGCGC AGACTGGACG CTACAAACCG
CTGATCCTGA CCGGCGCACT GCTGATGCCC GTAGCCATTC TGGGCATGGC TTTCACACCG
CCCCAGTCGC TGGTGGTGAT GAGCCTGTTC ATGATCCTGA CTGGCATCGC GACCGGCATG
CAATTCCCTA CTTCACTGGT CGGCACCCAG AACGCCGTCC AGCCCCGTGA CATGGGCGTG
GCCACCAGCA CGACCAACCT CTTCCGCTCA CTGGGCGGCG CAATGGGCGT GGCGCTGATG
TCGGCACTGT TACTGGCCAT GTTGCAGCAT GCCGGACTCG GTCAGCTCGG TGCGGGAGCC
CTTGGCGGCG AAGGCAGCTC CGGCAATGTG CTGCTCGACA GCCTCAATGC TGCCACCGGA
CCGGCACTGG AAACCCTGCG TATCGAACTG GCATCGACGT TCAGAAACCT GCTGATAACC
AGCGCGGCCA TTTCGTTACT GGGCCTTGCT GCGGCTGCGG CAATGCCCAA TACCCTTCTA
CGAGGCCGAG ACTAG
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| Protein sequence | MPSGFALTSL TQTPPAIRSI LFALMMAVLL SALDQTIVAV SMPAISAQFK DIDLLAWVIS
AYMVSLTVAV PIYGKLGDLY GRRKLMLFGL GLFTLASLFC GMAQSMEQLV LARVLQGIGA
GGMVSVSQAI IADIVPPRER GRYQGYFSSM YAVASVAGPV LGGLMTEYLS WRWVFLINLP
LGAAALIVAY RTLVGLPVPQ RKPIIDYLGT VLMIIGLTAL LLGITQIGQG HDLGNRDVQL
LLGTALVALA VFVWYERRAP EPLLPMHLFA NKSAVLCWCT VFFTSFQAIS LIVLMPLRYQ
TVTGGGADSA ALHLLPLAIG MPMGAYFSGR RTAQTGRYKP LILTGALLMP VAILGMAFTP
PQSLVVMSLF MILTGIATGM QFPTSLVGTQ NAVQPRDMGV ATSTTNLFRS LGGAMGVALM
SALLLAMLQH AGLGQLGAGA LGGEGSSGNV LLDSLNAATG PALETLRIEL ASTFRNLLIT
SAAISLLGLA AAAAMPNTLL RGRD
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