| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4296 |
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| Symbol | |
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| ID | 1185977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4842839 |
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| End bp | 4844164 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395638 |
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| Product | metabolite-proton symporter, putative |
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| Protein accession | NP_794052 |
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| Protein GI | 28871433 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCT CCAACCCCGC CTCCAACGGG CCGGCAGCCA GCATCGCCGG TCAGAAAACC
ACCTCCAGCC GTCTCAAGTC CATTTTCAGT GGCTCGGTCG GCAATATGGT CGAGTGGTAC
GACTGGTACG TCTACGCAGC TTTCTCGCTG TACTTCGCCA AAGCGTTCTT CCCCAAGGGC
GACACCACCG CCCAATTGCT CAACACCGCC GCGATCTTCG CCGTCGGCTT TCTGATGCGA
CCTATCGGTG GCTGGCTGAT GGGGCTGTAC GCTGACTACA AAGGACGCAA GGCCGCGCTG
ATGGCGTCGG TGCTGCTGAT GTGTTTCGGC TCGCTGATCA TCGCCCTGAC CCCGGGCTAC
GAAAGCATTG GCGTCGGTGC TCCGATCCTG CTGGTATTCG CCAGATTGCT GCAAGGCCTG
TCGGTCGGCG GCGAGTACGG TACTTCGGCC ACCTACCTCA GTGAGATGGC GACCAAAGAG
CGTCGCGGCT TCTTTTCCAG CTTCCAGTAC GTCACGCTGA TTTCCGGTCA GCTCATCGCG
CTGGCCGTAT TGATTGTGTT GCAACAGACC CTGACCACCG AGCAGCTGTA TGCCTGGGGC
TGGCGCATCC CGTTCGTCAT CGGTGCCCTG TGCGCGGTAG TGGCGCTGTT TCTGCGTCGC
GGCATGGAAG AAACCGAGTC GTTCACCCGC AAGAAAAAGG AAAAACGCAA GGAAAGCCTG
ATGCGCACGT TGATACGCCA TCCCAAGGAA CTGATGACCG TGGTCGGCCT GACCATGGGC
GGTACGCTGG CGTTCTACAC CTACACCACG TACATGCAGA AGTACCTGGT CAACACCGTC
GGCATGAGCA TCACCGACTC GACCTCGATA TCGGCCGCTA CGCTGTTTCT GTTCATGTTG
TTGCAGCCCG TGGTCGGGGC GCTGTCCGAC AAGATCGGGC GACGTCCGAT CCTGATTGCA
TTTGGCGTAC TGGGCACGCT GTGCACGGTG CCGATCCTGA CCACCTTGCA CACCATTCAA
ACCTGGTGGG GCGCGTTCTT CCTGATCATG GCAGCGCTGA TCATCGTCAG TGGCTACACC
TCGATCAACG CAGTGGTCAA AGCCGAACTG TTTCCGACCG AGATCCGCGC ACTGGGCGTC
GGCCTGCCGT ATGCCCTGAC CGTGTCGATC TTCGGTGGCA CAGCGGAATA CATCGCACTG
TGGTTCAAGA GCATCGGTAT GGAGACGGGC TATTACTGGT ACGTCACCGC CTGCATCGCC
TGTTCGTTGC TGGTGTACGT CTTCATGAAA GACACCCGCA AACACTCGCG TATCGAAACT
GACTGA
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| Protein sequence | METSNPASNG PAASIAGQKT TSSRLKSIFS GSVGNMVEWY DWYVYAAFSL YFAKAFFPKG
DTTAQLLNTA AIFAVGFLMR PIGGWLMGLY ADYKGRKAAL MASVLLMCFG SLIIALTPGY
ESIGVGAPIL LVFARLLQGL SVGGEYGTSA TYLSEMATKE RRGFFSSFQY VTLISGQLIA
LAVLIVLQQT LTTEQLYAWG WRIPFVIGAL CAVVALFLRR GMEETESFTR KKKEKRKESL
MRTLIRHPKE LMTVVGLTMG GTLAFYTYTT YMQKYLVNTV GMSITDSTSI SAATLFLFML
LQPVVGALSD KIGRRPILIA FGVLGTLCTV PILTTLHTIQ TWWGAFFLIM AALIIVSGYT
SINAVVKAEL FPTEIRALGV GLPYALTVSI FGGTAEYIAL WFKSIGMETG YYWYVTACIA
CSLLVYVFMK DTRKHSRIET D
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