| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4291 |
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| Symbol | |
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| ID | 1185972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4833443 |
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| End bp | 4835200 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395633 |
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| Product | sensor histidine kinase |
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| Protein accession | NP_794047 |
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| Protein GI | 28871428 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTCA AGCATCGCTA CTGGCGCATC ACTCTTTACG TGCTGTTGAT TCTGGCCGGC
GCTGCACTGT CGTCCGGAAT TGCAATGCGT CAGGCGCAGC GCCATACGCT GTCAGAAGAT
GCCGCACGTG CCGGTGGGCA ACTGGCGCTG TATGCCAACA CCCTGCACAC CCTCATCGAG
CGTTATCGCG CCCTTCCCTC GGTGCTGGCG CTCGACCCGC AGATTCGTGC TGCGTTAAAC
GGCCCGGTGA CCGAAGAGGT GCAAAACGCG CTCAACATCA AGCTGGAAAA GATCAACAGC
GCGGCGCATT CATCGACCCT TGAATTGCTC GATCTGCACG GCCTTGCGAT CGGCGCGAGC
AACTGGCGCA CGCCCAACAG CTACGTCGGC CACAATTACG GTTTTCGCCC CTACTTCCTG
CAAACCCGAG CCCAAGGCAC CGGGCGTTTC TACGCGGTGG GTGTGACCAC CGGCATTCCC
GGGTACTTTC TGTCCAGTGC CGTCGTGGAC GATGCGGGTG CATTCATGGG CGCGATGGTG
GTCAAACTGG AGTTTCCGAA CCTTGAACAG GAATGGGGCC AGGGTGACGA CCTGCTGCTG
GTCAGCGACG AGAAAGGCAT TGTCTTCATC GCCAATCGGG CTGGCTGGCG CTATCGCGAG
CTGCTGCCCA TTTCAGTCGA GGGCCGTGCC GATCTGTTGC GCACCCGCCA GTACGACAAG
AAATCACTGT CACTGCTGCG CAGTCGGGTG CTTGAGCGTT TCGGTGAAAA CAGCCACTTG
AGCCGTATTG AAGGCCCGGA CGGCGCAGCT GATTACCTAT GGCAGTCGCT GCCGCTGCCC
GACGAAAACT GGACGTTGCA CCTGCTGCGC AAGCCGCCCG TCTCCAGTGA GGACGTTCGC
AACGCCGGGC TGGCCGCCGC AGGTATCTGG CTGGCCATCG TGTTTCTGGG ACTGTTTCTT
TACCAGCGCT GGCGACTGGC GCGGTTACGC GAGCGCAATC GTGACGAACT TGAGCGTCTG
GTACAAGAGC GCACCCGTGA TCTGCAAACC GCGCAGGACG GCCTTGTGCA GTCGGCCAAA
CTTGCCGCGC TGGGGCAGAT GTCGGCGGCG CTGGCCCATG AAATCAATCA GCCGCTGACC
GCCCAGCGCA TGCAACTGGC AACCCTGCGC CTGCTGCTGG ATCAGGGCCG AGTCGATGAA
GCCTGCAAAG CGCTGGTGCC GGTGGATCAG CAACTGACGC GCATGGCCGC ACTGACCGGC
CACCTGAAAA CCTTTGCGCG CAAGAGCCCC AGCGGCCTGC GCGAGCGTCT GGACCTGGCC
ACCGTCGTCG ATCAGGCCTT GTTGCTGCTC GAACCGCGTC TGCGCGAAGA GCGCATTGAC
TGCGTGCTGC ACCTGGCGCG GCCCGCCTGG GTGCGCGGTG ATGCGATACG TCTGGAGCAG
GTGCTGATCA ATCTGCTGCG CAACGCACTG GATGCCATGC GAGAGCGCCC GTCCAGACGC
CTCGAAGTCC GTATCGATGC CTGCAACAGC CACTGGCGGC TCAGCGTCAG CGACAGCGGC
GCGGGAATCG CGGCACAACA TATGGCCAGC CTGTTCGATC CGTTCTTCAC CACCAAACCG
GTGGGCGATG GCCTGGGCCT TGGTCTGGCG GTGTCGTACG CGATCATTCA CGAACTGGGC
GGGCAACTGA CTGCTGAAAA CCATGCCGAG GGTGCGCGGT TCTGGTTCAG CCTGCCTAAT
GACTTTCTGG AGACCTGA
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| Protein sequence | MTLKHRYWRI TLYVLLILAG AALSSGIAMR QAQRHTLSED AARAGGQLAL YANTLHTLIE
RYRALPSVLA LDPQIRAALN GPVTEEVQNA LNIKLEKINS AAHSSTLELL DLHGLAIGAS
NWRTPNSYVG HNYGFRPYFL QTRAQGTGRF YAVGVTTGIP GYFLSSAVVD DAGAFMGAMV
VKLEFPNLEQ EWGQGDDLLL VSDEKGIVFI ANRAGWRYRE LLPISVEGRA DLLRTRQYDK
KSLSLLRSRV LERFGENSHL SRIEGPDGAA DYLWQSLPLP DENWTLHLLR KPPVSSEDVR
NAGLAAAGIW LAIVFLGLFL YQRWRLARLR ERNRDELERL VQERTRDLQT AQDGLVQSAK
LAALGQMSAA LAHEINQPLT AQRMQLATLR LLLDQGRVDE ACKALVPVDQ QLTRMAALTG
HLKTFARKSP SGLRERLDLA TVVDQALLLL EPRLREERID CVLHLARPAW VRGDAIRLEQ
VLINLLRNAL DAMRERPSRR LEVRIDACNS HWRLSVSDSG AGIAAQHMAS LFDPFFTTKP
VGDGLGLGLA VSYAIIHELG GQLTAENHAE GARFWFSLPN DFLET
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