Gene PSPTO_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4289 
Symbol 
ID1185970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4830062 
End bp4830679 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content62% 
IMG OID637395631 
Producthypothetical protein 
Protein accessionNP_794045 
Protein GI28871426 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGTA GCGTGGTCGA TGCTGCGCAG ATGCTCGACA GCCAGACCAC GGTTCGTCTG 
GCAAGGCTGC TACGTGCCCA CGAGCAGGCA ACCGGTGAGC GGGTAGTGGT GGTGACCCAG 
GCTGATTTGC AGGGTGCGAG CCTCGAGGAA TTCGGCGCTC GGCTGGGCGA TGCGTGGGGG 
TTGGGGCTGC ACGGCGAGGA CGACAGCGTG CTGCTGATGA TCGACCGTGA CAAGCGCAAG 
GTGTTTATGG AGGTCGGCGC TGCCTTGCAG GATCGTCTCA GTGACGCGCA GAGCTCGTTG 
ATCATCGACA TGCTGATGAC CCCCGAGTTT GACGATGGCC GCTTTGCTGT CGGTATAGAG 
CGTGGTGCCC GTGCGGTCAT CGCAGCGCTG GGTGGTCAGA TACCTGACTA TCCTGAACCG 
ACACGGCAGA TGGCTGGCTA TGAGGAGCAG GCCAGTGACG ATCAGGTCTG GCTGTTCGCT 
GTTGTGCTGA CCCTTATTGT GTTGGCGATT GTGGTTATCA GCATCAGGCG CGGTGCCGCT 
GTACGGCCTG CACGTGACAG AACCGCTGAA CGCAGCGGCG GGCGCTTCGG TGGCGGCGGT 
GCATCAGGCA ACTGGTAG
 
Protein sequence
MTGSVVDAAQ MLDSQTTVRL ARLLRAHEQA TGERVVVVTQ ADLQGASLEE FGARLGDAWG 
LGLHGEDDSV LLMIDRDKRK VFMEVGAALQ DRLSDAQSSL IIDMLMTPEF DDGRFAVGIE 
RGARAVIAAL GGQIPDYPEP TRQMAGYEEQ ASDDQVWLFA VVLTLIVLAI VVISIRRGAA 
VRPARDRTAE RSGGRFGGGG ASGNW