Gene PSPTO_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4288 
Symbol 
ID1185969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4829410 
End bp4830027 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID637395630 
Producthypothetical protein 
Protein accessionNP_794044 
Protein GI28871425 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAT TGAACAAAGA CGAACAGCGG CAAGTCGCCG AAGCGATTGA TCGCGTCGAG 
CAACGTACCG ATGCCGAACT GGTCACGGTG CTGGCCGCTC GTTCCGATGA CTATGCCTAC 
ATGCCGCTGA TCTGGGCCGG GCTGATCGGC CTGTTGCTGC CGGGTACGGT CAATTACTGC 
GTTCAGTGGT TGAGCGCGGA CGAGCTGATG CTGGCGCAGA TGAGCACCTT CATTATCGTT 
GCGCTGGCGT GCCGCATCCC GAAAGTGTCC GCCTTGCTGG TGCCGGTCTC GGTCAGGCGC 
TGGCGTGCAG GCAACCTGGC GCGTCGGCAG TTTCTCGAGC AGAACCTGCA CAAGACCCAT 
GACGGCACCG GCATTCTGGT GTTTGTCAGT GAGGCCGAGC GTTATGTCGA AATTCTGGTT 
GATCATGGCA TCGCCAGTCG TCTGCACGAC GATACCTGGA AGGCAATGGT TGATGTGTTC 
ACTCAACAGG TCCGGGACGG GCAGATTCTG CAGGGGTTTC TGGGTTGTAT TCACGCCTGC 
GGCGAGCTGC TTGCCGATCA CGTGCCAGTG ACCCACGGTA AAAACGAACT GCCCAACAGG 
CTGGTGGTGC TGGGTTAA
 
Protein sequence
MALLNKDEQR QVAEAIDRVE QRTDAELVTV LAARSDDYAY MPLIWAGLIG LLLPGTVNYC 
VQWLSADELM LAQMSTFIIV ALACRIPKVS ALLVPVSVRR WRAGNLARRQ FLEQNLHKTH 
DGTGILVFVS EAERYVEILV DHGIASRLHD DTWKAMVDVF TQQVRDGQIL QGFLGCIHAC 
GELLADHVPV THGKNELPNR LVVLG