Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4281 |
Symbol | |
ID | 1185962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4821822 |
End bp | 4822262 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395623 |
Product | hypothetical protein |
Protein accession | NP_794037 |
Protein GI | 28871418 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCGAGC TGACCAGCTA CCTGGGCCTC CTGGCCGTGG CATTTGGTGC CGCAACGCTT CTGCCGCTGC AGTCTGAAGC AGTACTGGTC GGCATGCTCC TTTCGGAACG CTACGCGACA ATCCTTCTGT TGCTGATTGC AACGACGGGA AATGTACTGG GTTCGGTCGT GAATTGGTAC CTGGGGCGCT CGATTGAACG CTTTCGGCAC AAGCGCTGGT TCCCCGTCAG CGAGCGCCAC CTCGACAAAG CCCAAACCAT TTATGCACGG CATGGACGCT GGGCATTACT GCTCAGTTGG GTGCCCATCA TTGGTGACCC GATTACCATG ATCGCCGGCG TCATGCGTGA GCCGCTGTGG AGTTTTCTGC TCGTTGTGAC ACTTGCAAAA GCCTTGCGTT ATTTGACGCT GGCAGCGATC ACGCTGGGGT GGGCGGTGTA G
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Protein sequence | MFELTSYLGL LAVAFGAATL LPLQSEAVLV GMLLSERYAT ILLLLIATTG NVLGSVVNWY LGRSIERFRH KRWFPVSERH LDKAQTIYAR HGRWALLLSW VPIIGDPITM IAGVMREPLW SFLLVVTLAK ALRYLTLAAI TLGWAV
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