Gene PSPTO_4281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4281 
Symbol 
ID1185962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4821822 
End bp4822262 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content58% 
IMG OID637395623 
Producthypothetical protein 
Protein accessionNP_794037 
Protein GI28871418 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGAGC TGACCAGCTA CCTGGGCCTC CTGGCCGTGG CATTTGGTGC CGCAACGCTT 
CTGCCGCTGC AGTCTGAAGC AGTACTGGTC GGCATGCTCC TTTCGGAACG CTACGCGACA
ATCCTTCTGT TGCTGATTGC AACGACGGGA AATGTACTGG GTTCGGTCGT GAATTGGTAC
CTGGGGCGCT CGATTGAACG CTTTCGGCAC AAGCGCTGGT TCCCCGTCAG CGAGCGCCAC
CTCGACAAAG CCCAAACCAT TTATGCACGG CATGGACGCT GGGCATTACT GCTCAGTTGG
GTGCCCATCA TTGGTGACCC GATTACCATG ATCGCCGGCG TCATGCGTGA GCCGCTGTGG
AGTTTTCTGC TCGTTGTGAC ACTTGCAAAA GCCTTGCGTT ATTTGACGCT GGCAGCGATC
ACGCTGGGGT GGGCGGTGTA G
 
Protein sequence
MFELTSYLGL LAVAFGAATL LPLQSEAVLV GMLLSERYAT ILLLLIATTG NVLGSVVNWY 
LGRSIERFRH KRWFPVSERH LDKAQTIYAR HGRWALLLSW VPIIGDPITM IAGVMREPLW
SFLLVVTLAK ALRYLTLAAI TLGWAV